RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZNF519Q8TB69 540 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 MGARPQ8TDB4 240 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 SAP25Q8TEE9 199 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 NR4A3Q92570 626 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 SLCO2A1Q92959 643 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 ATP6V0A1Q93050 837 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 EPSTI1Q96J88 318 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 NSMCE3Q96MG7 304 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 OPRPNQ99935 248 aaPredicted RBP3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 DDX50Q9BQ39 737 aaKnown RBP3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 MAGEF1Q9HAY2 307 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 B3GAT2Q9NPZ5 323 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 TEX10Q9NXF1 929 aaPredicted RBP3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 BARHL2Q9NY43 387 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 PLCL2Q9UPR0 1127 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 ERVK-19Q9WJR5 959 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 KCNK6Q9Y257 313 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 FOXA2Q9Y261 457 aaPredicted RBP3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 EXOGQ9Y2C4 368 aaKnown RBP3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 EXOC6BQ9Y2D4 811 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 WIPI2Q9Y4P8 454 aa3.16□□□□□ -1.9
HMGXB4-205ENST00000464480 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GTPBP10A4D1E9 387 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SLC15A5A6NIM6 579 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 RTCAO00442 366 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 CHUKO15111 745 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ARHGEF9O43307 516 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SYT7O43581 403 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 KERAO60938 352 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 PRDM1O75626 825 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ZFAND5O76080 213 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GSTA2P09210 222 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 TRIM49P0CI25 452 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 TRIM49CP0CI26 452 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 RNF224P0DH78 156 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 THEGLP0DJG4 465 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ANPEPP15144 967 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 FERP16591 822 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ACKR3P25106 362 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GPR183P32249 361 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 FEN1P39748 380 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 NT5C2P49902 561 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ADARP55265 1226 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 KRTAP10-9P60411 292 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 DHODHQ02127 395 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 AP1B1Q10567 949 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 HYAL1Q12794 435 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 DRP2Q13474 957 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GPR50Q13585 617 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 LASP1Q14847 261 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 MTF1Q14872 753 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 LYPLAL1Q5VWZ2 237 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 PLPP4Q5VZY2 271 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ETFRF1Q6IPR1 90 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 CD164L2Q6UWJ8 174 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 Q6ZRP5 223 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 TOM1L2Q6ZVM7 507 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 Q6ZVQ6 151 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 DND1Q8IYX4 353 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SLC43A2Q8N370 569 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF614Q8N883 585 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 NAT8LQ8N9F0 302 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 NUP37Q8NFH4 326 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SPATA18Q8TC71 538 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GANCQ8TET4 914 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ANP32BQ92688 251 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SNX21Q969T3 373 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 SLC35C1Q96A29 364 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 FAM218AQ96MZ4 157 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 GAL3ST4Q96RP7 486 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ATP6V0BQ99437 205 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 FAM213AQ9BRX8 229 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 CCM2Q9BSQ5 444 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 PAPOLGQ9BWT3 736 aaKnown RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ACPTQ9BZG2 426 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 WWTR1Q9GZV5 400 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 TSPYL1Q9H0U9 437 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ZDHHC6Q9H6R6 413 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 DBNDD1Q9H9R9 158 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 S100A14Q9HCY8 104 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 PRMT8Q9NR22 394 aaPredicted RBP3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 DNAJC11Q9NVH1 559 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 KNSTRNQ9Y448 316 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ETV7Q9Y603 341 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 ZHX2Q9Y6X8 837 aa3.15□□□□□ -1.91
HMGXB4-205ENST00000464480 C5orf51A6NDU8 294 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 SERINC4A6NH21 518 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 KPNA7A9QM74 516 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 SIGLEC5O15389 551 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 LRCH4O75427 683 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF821O75541 412 aaPredicted RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 MTRF1O75570 445 aaKnown RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 OLFM2O95897 454 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 HMOX1P09601 288 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 ATP6V1E1P36543 226 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 SMSP52788 366 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 GSCP56915 257 aaPredicted RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 KCNK10P57789 538 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 CBX3Q13185 183 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 GCKRQ14397 625 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms