RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CLEC1AQ8NC01 280 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 FDCSPQ8NFU4 85 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 NACC2Q96BF6 587 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 PEX11GQ96HA9 241 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 RBCK1Q9BYM8 510 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 KCNK9Q9NPC2 374 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 PCTPQ9UKL6 214 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 MKL2Q9ULH7 1088 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 A0A0G2JN53 185 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 C4orf51C9J302 202 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 CHST10O43529 356 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 CLEC3AO75596 197 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 PDGFAP04085 211 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 SMIM10L1P0DMW3 83 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 PCNAP12004 261 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ACPPP15309 386 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 HNRNPH1P31943 449 aaKnown RBP16.09■□□□□ 0.17
VPS52-215ENST00000464425 EFNA3P52797 238 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 STXBP1P61764 594 aaKnown RBP16.09■□□□□ 0.17
VPS52-215ENST00000464425 BTN3A2P78410 334 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ASPHQ12797 758 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 MPP2Q14168 576 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 PCLAFQ15004 111 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 LIPMQ5VYY2 423 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 TCTN3Q6NUS6 607 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 MED27Q6P2C8 311 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ASB18Q6ZVZ8 466 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 GOLGA7Q7Z5G4 137 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 OR11G2Q8NGC1 345 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ZNF483Q8TF39 744 aaPredicted RBP16.09■□□□□ 0.17
VPS52-215ENST00000464425 SMIM10Q96HG1 83 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 RHBGQ9H310 441 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 IPPKQ9H8X2 491 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ACTR8Q9H981 624 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ATP13A2Q9NQ11 1180 aa16.09■□□□□ 0.17
VPS52-215ENST00000464425 ERI3O43414 337 aaKnown RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 UGDHO60701 494 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 TRIM13O60858 407 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 SH3BGRLO75368 114 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 CDC123O75794 336 aaPredicted RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 TBX6O95947 436 aaPredicted RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 GSTM2P28161 218 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 PGDP52209 483 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 SKP1P63208 163 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 EEF1A2Q05639 463 aaKnown RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 TUBB8Q3ZCM7 444 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 UNC50Q53HI1 259 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 PARP9Q8IXQ6 854 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 GALNT16Q8N428 558 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 UBE2E3Q969T4 207 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 MS4A6EQ96DS6 147 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 SEC16BQ96JE7 1060 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 FAR2Q96K12 515 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 TMEM237Q96Q45 408 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 F2RL3Q96RI0 385 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 NTMT1Q9BV86 223 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 NUDT9Q9BW91 350 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 VN1R1Q9GZP7 353 aa16.08■□□□□ 0.16
VPS52-215ENST00000464425 REXO4Q9GZR2 422 aaKnown RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 NOL11Q9H8H0 719 aaKnown RBP16.08■□□□□ 0.16
VPS52-215ENST00000464425 TMEM120BA0PK00 339 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 B8ZZF3 427 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 BIRC5O15392 142 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 B4GALT2O60909 372 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 CEACAM4O75871 244 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 SUPT7LO94864 414 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 BPGMP07738 259 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 ALDH3A1P30838 453 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 ARL1P40616 181 aaPredicted RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 PLA2G16P53816 162 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 CLCQ05315 142 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 AIMP2Q13155 320 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 COLEC12Q5KU26 742 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 LIPJQ5W064 366 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 GRHL2Q6ISB3 625 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 NIPAL1Q6NVV3 410 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 RPS27LQ71UM5 84 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 C10orf107Q8IVU9 208 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 OR7G3Q8NG95 312 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 PPP4R1Q8TF05 950 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 SREK1Q8WXA9 508 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 METTL21AQ8WXB1 218 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 TBC1D20Q96BZ9 403 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 NSUN5Q96P11 429 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 CDK15Q96Q40 435 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 ZNF160Q9HCG1 818 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 ZBTB26Q9HCK0 441 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 GPR83Q9NYM4 423 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 G3BP2Q9UN86 482 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 RNF11Q9Y3C5 154 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 PCDHGA9Q9Y5G4 932 aaKnown RBP16.07■□□□□ 0.16
VPS52-215ENST00000464425 BSNQ9UPA5 3926 aa16.07■□□□□ 0.16
VPS52-215ENST00000464425 IGHV3-20A0A0C4DH32 117 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 FAM227AF5H4B4 570 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 OR7A17O14581 309 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms