RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 SLCO1B7G3V0H7 640 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 C16orf97H3BN30 126 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 WWP2O00308 870 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 CCL22O00626 93 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MSTNO14793 375 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SMNDC1O75940 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MYO1DO94832 1006 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 RCBTB2O95199 551 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 VENTXO95231 258 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SERPINC1P01008 464 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 PRSS56P0CW18 603 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SLC25A16P16260 332 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 NFKB1P19838 968 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SRP14P37108 136 aaKnown RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 PIGAP37287 484 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 DSCR9P59020 149 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 RELAQ04206 551 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MPP3Q13368 585 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 GAB1Q13480 694 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 PDK2Q15119 407 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 DBN1Q16643 649 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 HADHQ16836 314 aaKnown RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 LYPD8Q6UX82 237 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 LRRC25Q8N386 305 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 ASZ1Q8WWH4 475 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 SLC44A1Q8WWI5 657 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MYOTQ9UBF9 498 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 GDF2Q9UK05 429 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 NAALAD2Q9Y3Q0 740 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 MRFAP1Q9Y605 127 aa12.21□□□□□ -0.45
C9orf3-211ENST00000463372 EPN1Q9Y6I3 576 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-211ENST00000463372 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 TCRBV16S1A1N1A0A5B0 115 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 ZNF860A6NHJ4 632 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 HAT1O14929 419 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 KPNA5O15131 536 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 EPHB6O15197 1021 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 KIF5CO60282 957 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 SOD3P08294 240 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 POU2F1P14859 743 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 GDF1P27539 372 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 KLK7P49862 253 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 NUDT6P53370 316 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 TSTA3Q13630 321 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-211ENST00000463372 FBLN7Q53RD9 439 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 HECTD2Q5U5R9 776 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 ZNF425Q6IV72 752 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 TMEM214Q6NUQ4 689 aaKnown RBP12.2□□□□□ -0.46
C9orf3-211ENST00000463372 QSOX2Q6ZRP7 698 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 PDSS2Q86YH6 399 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 PLD3Q8IV08 490 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 GCNT2Q8N0V5 402 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 NCLNQ969V3 563 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 JSRP1Q96MG2 331 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-211ENST00000463372 SLC39A3Q9BRY0 314 aa12.2□□□□□ -0.46
C9orf3-211ENST00000463372 MAGED1Q9Y5V3 778 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-211ENST00000463372 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ELOA3DA6NLF2 546 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 PRKNO60260 465 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 CCNDBP1O95273 360 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 THBS1P07996 1170 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 CYP4B1P13584 511 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 MAOAP21397 527 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 CCKARP32238 428 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 CD68P34810 354 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 BDKRB1P46663 353 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 KCNJ5P48544 419 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 BTG2P78543 158 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 FAPQ12884 760 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 NRF1Q16656 503 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ELOA3BQ3SY89 546 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 CCSMST1Q4G0I0 132 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ELOA2Q8IYF1 753 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 BANPQ8N9N5 519 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 FBXO15Q8NCQ5 510 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 PPHLN1Q8NEY8 458 aaKnown RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ELOA3Q8NG57 546 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 OR5T3Q8NGG3 340 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 GSDMBQ8TAX9 411 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 SKA2Q8WVK7 121 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 OXNAD1Q96HP4 312 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 C19orf43Q9BQ61 176 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 MACROD1Q9BQ69 325 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 ELOVL5Q9NYP7 299 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 TTC7AQ9ULT0 858 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-211ENST00000463372 PCDHGB1Q9Y5G3 927 aa12.19□□□□□ -0.46
C9orf3-211ENST00000463372 KLF4O43474 513 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 TRAPPC6AO75865 159 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 AGTP01019 485 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 FTLP02792 175 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms