RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PPP1R14AQ96A00 147 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PTERQ96BW5 349 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KLHL5Q96PQ7 755 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TRNT1Q96Q11 434 aaKnown RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TBL1YQ9BQ87 522 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ULBP1Q9BZM6 244 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 RIBC2Q9H4K1 309 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 RNF167Q9H6Y7 350 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 EIF3KQ9UBQ5 218 aaKnown RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TEKT2Q9UIF3 430 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TMPRSS11EQ9UL52 423 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 VPS4AQ9UN37 437 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 U3KQV3 271 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 LAMA3Q16787 3333 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SHROOM3Q8TF72 1996 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 FAM72CH0Y354 149 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 BET1O15155 118 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 DFNA5O60443 496 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 MLYCDO95822 493 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 ALPPP05187 535 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 ADH1AP07327 375 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CYP4B1P13584 511 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 TNFSF8P32971 234 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CA5AP35218 305 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SOX6P35712 828 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 GPR15P49685 360 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 GZMKP49863 264 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CSNK2BP67870 215 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SMAD3P84022 425 aaKnown RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 FAM72AQ5TYM5 149 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 PLPP4Q5VZY2 271 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 FAM72DQ6L9T8 149 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 ANGPTL8Q6UXH0 198 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 RAB44Q7Z6P3 723 aaPredicted RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 FAM72BQ86X60 149 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 GLB1L3Q8NCI6 653 aaPredicted RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 GALNT6Q8NCL4 622 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 OR2T12Q8NG77 320 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 OR8J3Q8NGG0 315 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CEP76Q8TAP6 659 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 MVB12AQ96EY5 273 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CCDC120Q96HB5 630 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 TMEM80Q96HE8 168 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CEP19Q96LK0 163 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 Q96MT0 163 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 NSUN5Q96P11 429 aaKnown RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SEPT5Q99719 369 aaPredicted RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 BEX2Q9BXY8 128 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 UCK2Q9BZX2 261 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 MAGIXQ9H6Y5 334 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 SLC28A3Q9HAS3 691 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 CRLF2Q9HC73 371 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 B3GNT2Q9NY97 397 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 NDRG4Q9ULP0 352 aaKnown RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 KLHL20Q9Y2M5 609 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 AAR2Q9Y312 384 aaKnown RBP8.37□□□□□ -1.07
SHQ1-203ENST00000463369 NUP205Q92621 2012 aa8.37□□□□□ -1.07
SHQ1-203ENST00000463369 LOC100506127A0A0U1RQW1 187 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 A0A1B0GTL3 188 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 HIDE1A8MVS5 230 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 TFECO14948 347 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 TGM5O43548 720 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 WBP4O75554 376 aaKnown RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 SCELO95171 688 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 IFI30P13284 250 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 JUPP14923 745 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ATF6P18850 670 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 DAPP51397 102 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 MAPK12P53778 367 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ARF3P61204 181 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ERVK-8P63133 956 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 PITX1P78337 314 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ARF1P84077 181 aaKnown RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 SOWAHCQ53LP3 525 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 SDHAF4Q5VUM1 108 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 OTUD1Q5VV17 481 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 TIGD3Q6B0B8 471 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 LETMD1Q6P1Q0 360 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 C11orf88Q6PI97 169 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 DET1Q7L5Y6 550 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 BHLHA9Q7RTU4 235 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 BNIPLQ7Z465 357 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 RDH10Q8IZV5 341 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 NPWQ8N729 165 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF548Q8NEK5 533 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 SPATA22Q8NHS9 363 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 LRRC20Q8TCA0 184 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 BLOC1S5Q8TDH9 187 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 NDRG1Q92597 394 aaKnown RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 NT5C3BQ969T7 300 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 NCLNQ969V3 563 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 MAGEB10Q96LZ2 347 aaPredicted RBP8.36□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF599Q96NL3 588 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 GABARAPL1Q9H0R8 117 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 MMP28Q9H239 520 aa8.36□□□□□ -1.07
SHQ1-203ENST00000463369 OR51E2Q9H255 320 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms