RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KCNN3Q9UGI6 736 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 CTAGE15A4D2H0 777 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 URADA6NGE7 173 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 PDE9AO76083 593 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 MYO1DO94832 1006 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 HOXD4P09016 255 aaPredicted RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 SMIM10L1P0DMW3 83 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 NR0B1P51843 470 aaKnown RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 CDKN2DP55273 166 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 HYAL2Q12891 473 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 RBM20Q5T481 1227 aaKnown RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 TTC27Q6P3X3 843 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 CTAGE6Q86UF2 777 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 TMEM200AQ86VY9 491 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 CCDC71Q8IV32 467 aaPredicted RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 ANKRD53Q8N9V6 530 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 SMIM10Q96HG1 83 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 RHBGQ9H310 441 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 TIMMDC1Q9NPL8 285 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 ZNF223Q9UK11 482 aaPredicted RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 FBXW2Q9UKT8 454 aa19.33■□□□□ 0.68
CPSF7-209ENST00000463244 FLNAP21333 2647 aaKnown RBP19.33■□□□□ 0.68
CPSF7-209ENST00000463244 TUBB4AP04350 444 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 GABRB3P28472 473 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 CXCR5P32302 372 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 HNF4AP41235 474 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 REEP5Q00765 189 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 PMPCAQ10713 525 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 CSHL1Q14406 222 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 ACAD11Q709F0 780 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 SPC24Q8NBT2 197 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 FBXL8Q96CD0 374 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 KLHL31Q9H511 634 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 DEPPQ9NTK1 212 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 PPIEQ9UNP9 301 aaKnown RBP19.32■□□□□ 0.68
CPSF7-209ENST00000463244 MMACHCQ9Y4U1 282 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 EML6Q6ZMW3 1958 aa19.32■□□□□ 0.68
CPSF7-209ENST00000463244 ABCA2Q9BZC7 2435 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 PABPN1LA6NDY0 278 aaKnown RBP19.31■□□□□ 0.68
CPSF7-209ENST00000463244 C4orf51C9J302 202 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 DNAJA1P31689 397 aaKnown RBP19.31■□□□□ 0.68
CPSF7-209ENST00000463244 GPR143P51810 404 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 NUP107P57740 925 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 CES4AQ5XG92 561 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 PAOXQ6QHF9 649 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 CA13Q8N1Q1 262 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 PSD4Q8NDX1 1056 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 TRPV3Q8NET8 790 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 ATL1Q8WXF7 558 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 VMP1Q96GC9 406 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 PDLIM2Q96JY6 352 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 TSNARE1Q96NA8 513 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 TMUB1Q9BVT8 246 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 AICDAQ9GZX7 198 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 DEFB127Q9H1M4 99 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 KCMF1Q9P0J7 381 aa19.31■□□□□ 0.68
CPSF7-209ENST00000463244 CDC25BP30305 580 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 SSR4P51571 173 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 IL2P60568 153 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 CRYMQ14894 314 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 SCUBE1Q8IWY4 988 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 NAT8LQ8N9F0 302 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 NRGNQ92686 78 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 NCLNQ969V3 563 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 TRIM54Q9BYV2 358 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 ZDHHC11Q9H8X9 412 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 PELI2Q9HAT8 420 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 SLC24A3Q9HC58 644 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 LZTFL1Q9NQ48 299 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 ERVK-11Q9UQG0 969 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 YARS2Q9Y2Z4 477 aaKnown RBP19.3■□□□□ 0.68
CPSF7-209ENST00000463244 CLDN16Q9Y5I7 305 aa19.3■□□□□ 0.68
CPSF7-209ENST00000463244 PINLYPA6NC86 204 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 PRKNO60260 465 aaPredicted RBP19.29■□□□□ 0.68
CPSF7-209ENST00000463244 NADKO95544 446 aaPredicted RBP19.29■□□□□ 0.68
CPSF7-209ENST00000463244 GUCA1CO95843 209 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 SERPINA6P08185 405 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 PGAM1P18669 254 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 PPIAP62937 165 aaKnown RBP19.29■□□□□ 0.68
CPSF7-209ENST00000463244 MYBPHQ13203 477 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 GXYLT1Q4G148 440 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 CNTN4Q8IWV2 1026 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 OR5M3Q8NGP4 307 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 CREB3L4Q8TEY5 395 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 AIF1LQ9BQI0 150 aa19.29■□□□□ 0.68
CPSF7-209ENST00000463244 PNO1Q9NRX1 252 aaKnown RBP19.29■□□□□ 0.68
CPSF7-209ENST00000463244 DNHD1Q96M86 4753 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 TMEM200CA6NKL6 621 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 A8MVJ9 347 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 NPIPA2E9PIF3 369 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 NPIPA3F8WFD2 350 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 TGFBR3LH3BV60 316 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 KLK8O60259 260 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 AHSGP02765 367 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 ENO2P09104 434 aaPredicted RBP19.28■□□□□ 0.68
CPSF7-209ENST00000463244 CD99P14209 185 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 IST1P53990 364 aa19.28■□□□□ 0.68
CPSF7-209ENST00000463244 PDAP1Q13442 181 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms