RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 CHCHD4Q8N4Q1 142 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ASCC1Q8N9N2 400 aaKnown RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 OR4A15Q8NGL6 344 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 IPCEF1Q8WWN9 437 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ECHDC3Q96DC8 303 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 HRASLS5Q96KN8 279 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 PPIL1Q9Y3C6 166 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 PCDHGB3Q9Y5G1 929 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 LYVE1Q9Y5Y7 322 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 SMLR1H3BR10 107 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 AP2A2O94973 939 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ACRV1P26436 265 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 RPS19P39019 145 aaKnown RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 MAGEA2P43356 314 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 NFE2L1Q14494 772 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 VEPH1Q14D04 833 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 LIPKQ5VXJ0 399 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 FAM131AQ6UXB0 335 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 NLRP8Q86W28 1048 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 TP53I13Q8NBR0 393 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 OR6F1Q8NGZ6 308 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 AUTS2Q8WXX7 1259 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ZNF558Q96NG5 402 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ISPDA4D126 451 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 GABRR3A8MPY1 467 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 MEN1O00255 615 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 GPX5O75715 221 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ETHE1O95571 254 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 PTTG1O95997 202 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 AMD1P17707 334 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 PTNP21246 168 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CXCR2P25025 360 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 HTR3AP46098 478 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CRYBA2P53672 197 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CXCR4P61073 352 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 KCNJ10P78508 379 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 NAE1Q13564 534 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 LRIF1Q5T3J3 769 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CPTPQ5TA50 214 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 TMIGD1Q6UXZ0 262 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 MACC1Q6ZN28 852 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 LILRA3Q8N6C8 439 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 AQP11Q8NBQ7 271 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 CIDECQ96AQ7 238 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 OTUB1Q96FW1 271 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-208ENST00000463007 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 NDUFAF4Q9P032 175 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 PEX16Q9Y5Y5 336 aa11.93□□□□□ -0.5
HDAC4-208ENST00000463007 A0A1W2PQ09 198 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 NPIPB15A6NHN6 443 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TEX28O15482 410 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TMCC2O75069 709 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CLEC2LP0C7M8 214 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CNR2P34972 360 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 DEFB103AP81534 67 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 ZNF45Q02386 682 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 LMAN2Q12907 356 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TTLL9Q3SXZ7 439 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CCSMST1Q4G0I0 132 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CCDC58Q4VC31 144 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CBLL1Q75N03 491 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 ST13P5Q8NFI4 369 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 FBLIM1Q8WUP2 373 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 USP7Q93009 1102 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 DEFB118Q96PH6 123 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 FAM129BQ96TA1 746 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 NTMT1Q9BV86 223 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TRAV19A0A0A6YYK7 116 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 E7EQ34 232 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 GGT2P36268 569 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TLE2Q04725 743 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 CDC20Q12834 499 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 STARD3Q14849 445 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 RAB43Q86YS6 212 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 ZFP41Q8N8Y5 198 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 FIBINQ8TAL6 211 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 COQ8BQ96D53 544 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 TRPS1Q9UHF7 1281 aa11.92□□□□□ -0.5
HDAC4-208ENST00000463007 MTCL1Q9Y4B5 1905 aaKnown RBP11.92□□□□□ -0.5
HDAC4-208ENST00000463007 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-208ENST00000463007 H3BQ06 376 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-208ENST00000463007 PRPS2P11908 318 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 TNNI3P19429 210 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 PTGER1P34995 402 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 PREPP48147 710 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 EPHB3P54753 998 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 ITGA1P56199 1179 aa11.91□□□□□ -0.5
HDAC4-208ENST00000463007 HOXC5Q00444 222 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms