RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 STX3Q13277 289 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SGCGQ13326 291 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PMS2P11Q13670 270 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 ZNF750Q32MQ0 723 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TECRLQ5HYJ1 363 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SEL1L3Q68CR1 1132 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3GQ6DHY5 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3CQ6IPX1 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PNCKQ6P2M8 343 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 KIAA1324Q6UXG2 1013 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 Q6ZS52 159 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 ZCCHC23Q6ZST2 131 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 ISCA2Q86U28 154 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 KBTBD6Q86V97 674 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3Q8IZP1 549 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PELI3Q8N2H9 469 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 ZBTB2Q8N680 514 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 RHEBL1Q8TAI7 183 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 STAG3L4Q8TBR4 150 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 LKAAEAR1Q8TD35 194 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 KIAA1191Q96A73 305 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PTERQ96BW5 349 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 GRAMD1AQ96CP6 724 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SGF29Q96ES7 293 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 LINGO1Q96FE5 620 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PDLIM5Q96HC4 596 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 ELAC2Q9BQ52 826 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TSSK1BQ9BXA7 367 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 DERL2Q9GZP9 239 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TFB2MQ9H5Q4 396 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SLCO1B3Q9NPD5 702 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 WNT16Q9UBV4 365 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 FZD4Q9ULV1 537 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SCN8AQ9UQD0 1980 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 A0A1W2PPC4 97 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 KANSL1LA0AUZ9 987 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CCDC189A1A4V9 331 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 PRR23AA6NEV1 266 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ZAR1LA6NP61 321 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CDC7O00311 574 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ATG13O75143 517 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SMIM24O75264 130 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SNNO75324 88 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CDK14O94921 469 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 TSPAN12O95859 305 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 PAK4O96013 591 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 FTH1P02794 183 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 PCCBP05166 539 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 TPBGLP0DKB5 382 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CBSLP0DN79 551 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 JUPP14923 745 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 GABRG2P18507 467 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ATP5F1P24539 256 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CCR7P32248 378 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CBSP35520 551 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SLC1A6P48664 564 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 HMGA2P52926 109 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ADPRHP54922 357 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 STARD6P59095 220 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ASPHQ12797 758 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SF3A3Q12874 501 aaKnown RBP eCLIP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 OR4D1Q15615 310 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 WSCD2Q2TBF2 565 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 TTLL9Q3SXZ7 439 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ACSBG2Q5FVE4 666 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 GKAP1Q5VSY0 366 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 LIPMQ5VYY2 423 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CES4AQ5XG92 561 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 KIAA1161Q6NSJ0 714 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 NEK5Q6P3R8 708 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 TMEM220Q6QAJ8 160 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 NAPRTQ6XQN6 538 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SYT13Q7L8C5 426 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 OTOAQ7RTW8 1153 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 PIGWQ7Z7B1 504 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ADGRG6Q86SQ4 1221 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 HORMAD1Q86X24 394 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SLC22A9Q8IVM8 553 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 IZUMO1Q8IYV9 350 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SDR16C5Q8N3Y7 309 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 OR2C3Q8N628 320 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 RASGEF1AQ8N9B8 481 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 OR6Y1Q8NGX8 325 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 XAGE5Q8WWM1 108 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SLC9A6Q92581 669 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 KLK6Q92876 244 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CCDC126Q96EE4 140 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 HIC2Q96JB3 615 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 LENG8Q96PV6 779 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 GATA5Q9BWX5 397 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SLC17A9Q9BYT1 436 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 SYNPO2LQ9H987 977 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 PREBQ9HCU5 417 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 LTB4R2Q9NPC1 389 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 ITM2CQ9NQX7 267 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 THAP1Q9NVV9 213 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 DKK4Q9UBT3 224 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms