RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CDKN3Q16667 212 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C2orf27AQ580R0 203 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 LYPD8Q6UX82 237 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 NEK10Q6ZWH5 1172 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 CELF5Q8N6W0 485 aaKnown RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PIK3C3Q8NEB9 887 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 NXPE3Q969Y0 559 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C5AR2Q9P296 337 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 KCNN3Q9UGI6 736 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 TCRBV5S2A0A599 114 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PCP4L1A6NKN8 68 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C12orf71A8MTZ7 269 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FABP3P05413 133 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C6P13671 934 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PFKLP17858 780 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 UAP1L1Q3KQV9 507 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 RBM48Q5RL73 367 aaKnown RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 SDE2Q6IQ49 451 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF544Q6NX49 715 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 SFTPA1Q8IWL2 248 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 SVOPQ8N4V2 548 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 BPIFB1Q8TDL5 484 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 TP53INP1Q96A56 240 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 HSH2DQ96JZ2 352 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 MTIF3Q9H2K0 278 aaKnown RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C8orf4Q9NR00 106 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FBXO8Q9NRD0 319 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 RPS6KA6Q9UK32 745 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 A0A096LPI6 279 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 LOC100130705A0A1B0GUX0 176 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 PRRT4C9JH25 899 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ANKRD28O15084 1053 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ANGPTL1O95841 491 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 CYP17A1P05093 508 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 HTR2BP41595 481 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ZFP36L2P47974 494 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 CLK1P49759 484 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ADARB1P78563 741 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TP53BP2Q13625 1128 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 AGAP6Q5VW22 663 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TUBA3EQ6PEY2 450 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 P2RY8Q86VZ1 359 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 DTX3Q8N9I9 347 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 PPP1R16AQ96I34 528 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 AGAP4Q96P64 663 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 NRTNQ99748 197 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 SLC52A3Q9NQ40 469 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TAC3Q9UHF0 121 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ZW10O43264 779 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 C6orf47O95873 294 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 SLC14A1Q13336 389 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 SUZ12Q15022 739 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TNFAIP8L2Q6P589 184 aaPredicted RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 OR5H6Q8NGV6 325 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF480Q8WV37 535 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 EXOSC8Q96B26 276 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 MCCC1Q96RQ3 725 aaPredicted RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 FAM118AQ9NWS6 357 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 PCM1Q15154 2024 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 GABRR3A8MPY1 467 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 PRAMEF4O60810 478 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ERAL1O75616 437 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 CA3P07451 260 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 KDELR2P33947 212 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 DCTP40126 519 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 EIF2DP41214 584 aaKnown RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 PRAMEF9Q5VWM5 478 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 HMGN2P46Q86SG4 172 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 FAM83FQ8NEG4 500 aaPredicted RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TFGQ92734 400 aaPredicted RBP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 USP7Q93009 1102 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 ZHX1-C8orf76Q96EF9 292 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 RERGLQ9H628 205 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 TEKT2Q9UIF3 430 aa14.79□□□□□ -0.04
LMNB1-203ENST00000460265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.79□□□□□ -0.04
LMNB1-203ENST00000460265 H0YAE9 185 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 SLC31A1O15431 190 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 IFI30P13284 250 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ACP5P13686 325 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 RRM2P31350 389 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 HSPB3Q12988 150 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 GPM6BQ13491 265 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 GANABQ14697 944 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ZXDCQ2QGD7 858 aaPredicted RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 C6orf141Q5SZD1 244 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OR2T5Q6IEZ7 315 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 LEMD2Q8NC56 503 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OR2T29Q8NH02 315 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OR5K1Q8NHB7 308 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ANGPTL6Q8NI99 470 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 PIK3R3Q92569 461 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OTUB1Q96FW1 271 aaPredicted RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 FERD3LQ96RJ6 166 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 LYSMD1Q96S90 227 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms