RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 UHRF1Q96T88 793 aaPredicted RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 TIMM29Q9BSF4 260 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ZDHHC5Q9C0B5 715 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 CARS2Q9HA77 564 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 FGF22Q9HCT0 170 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ACSL5Q9ULC5 683 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 KCNK6Q9Y257 313 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 GMPPBQ9Y5P6 360 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ST14Q9Y5Y6 855 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 A0A0A6YYJ9 748 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 PRSS38A1L453 326 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 SCAMP1O15126 338 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 BRINP1O60477 761 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 SNAP29O95721 258 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 IFNA16P05015 189 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ALDOCP09972 364 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 THRAP10827 490 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 CDH2P19022 906 aaPredicted RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 KELP23276 732 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 PRDX6P30041 224 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 TBPL1P62380 186 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 GALK2Q01415 458 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 FASTKQ14296 549 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 GRB7Q14451 532 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 NR6A1Q15406 480 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 GTDC1Q4AE62 458 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 PYCR3Q53H96 274 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 XKR7Q5GH72 579 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 C1orf146Q5VVC0 180 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ZNF425Q6IV72 752 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 NANOGP8Q6NSW7 305 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ENPP7Q6UWV6 458 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 DCUN1D3Q8IWE4 304 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 CARFQ8N187 725 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 OR5AR1Q8NGP9 310 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 MAFAQ8NHW3 353 aaPredicted RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 RP9Q8TA86 221 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 ZNF480Q8WV37 535 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 ZC3H10Q96K80 434 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 MIPEPQ99797 713 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 GPR174Q9BXC1 333 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 MRPS26Q9BYN8 205 aaKnown RBP9.97□□□□□ -0.81
HERC4-207ENST00000460168 TPSD1Q9BZJ3 242 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 SACM1LQ9NTJ5 587 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 CCDC167Q9P0B6 97 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 SH3BGRL2Q9UJC5 107 aa9.97□□□□□ -0.81
HERC4-207ENST00000460168 PSMD12O00232 456 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 ENTPD5O75356 428 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 IGLV3-19P01714 112 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 ADH7P40394 386 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 MAN2A2P49641 1150 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 RAP1GDS1P52306 607 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 KIAA1024LP59773 190 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 IRF8Q02556 426 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 TARDBPQ13148 414 aaKnown RBP eCLIP9.96□□□□□ -0.82
HERC4-207ENST00000460168 CHIT1Q13231 466 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 PRKG2Q13237 762 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 NFATC4Q14934 902 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 OXA1LQ15070 435 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 RPS6KA2Q15349 733 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 IMPG1Q17R60 797 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 SGO1Q5FBB7 561 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 CAPN13Q6MZZ7 669 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 KRT74Q7RTS7 529 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 RD3Q7Z3Z2 195 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 ASCC1Q8N9N2 400 aaKnown RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 FNDC5Q8NAU1 212 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 CATSPER1Q8NEC5 780 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 OR2T11Q8NH01 316 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 FBXO27Q8NI29 283 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 BMFQ96LC9 184 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 WDR92Q96MX6 357 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 SEC22CQ9BRL7 303 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 SLC29A3Q9BZD2 475 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 OR2B2Q9GZK3 357 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 C6orf62Q9GZU0 229 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 ELOVL6Q9H5J4 265 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 GIMAP4Q9NUV9 329 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 ZNF490Q9ULM2 529 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.82
HERC4-207ENST00000460168 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.82
HERC4-207ENST00000460168 OR6C74A6NCV1 312 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 PDZK1P1A8MUH7 402 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 ZNF217O75362 1048 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 CLPTM1O96005 669 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 HOXC4P09017 264 aaPredicted RBP9.95□□□□□ -0.82
HERC4-207ENST00000460168 IDSP22304 550 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 CD6P30203 668 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 OXTRP30559 389 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 CDK9P50750 372 aaKnown RBP9.95□□□□□ -0.82
HERC4-207ENST00000460168 CHN2P52757 468 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 RNF4P78317 190 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 FZD5Q13467 585 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 ATP1A4Q13733 1029 aa9.95□□□□□ -0.82
HERC4-207ENST00000460168 TSC22D1Q15714 1073 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms