RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SSTR1P30872 391 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 ALDH6A1Q02252 535 aaKnown RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 ART3Q13508 389 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 C18orf21Q32NC0 220 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 KRTCAP3Q53RY4 240 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 CDKL4Q5MAI5 379 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 GALNTL5Q7Z4T8 443 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 ARMC10Q8N2F6 343 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 ADAMTS18Q8TE60 1221 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 MAGED4Q96JG8 741 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 GPR22Q99680 433 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 RBBP8Q99708 897 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 CPNE1Q99829 537 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 ERP44Q9BS26 406 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 TMEM79Q9BSE2 394 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 NPLQ9BXD5 320 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 RHBGQ9H310 441 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 EHD1Q9H4M9 534 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 NT5DC2Q9H857 520 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 TRIM45Q9H8W5 580 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 CAB39LQ9H9S4 337 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 NECTIN3Q9NQS3 549 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 PYCARDQ9ULZ3 195 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 KLF2Q9Y5W3 355 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 FAM227AF5H4B4 570 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 ERI3O43414 337 aaKnown RBP21.31■■□□□ 1
PTPN4-207ENST00000460162 NME2P1O60361 137 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 CLEC3AO75596 197 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 SLC25A12O75746 678 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 PIAS1O75925 651 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 NME2P22392 152 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 GGT5P36269 586 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 MLF1P58340 268 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 ATP6V0D1P61421 351 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 BTN3A2P78410 334 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 SLC25A25Q6KCM7 469 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 SCUBE1Q8IWY4 988 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 ZNF808Q8N4W9 903 aaPredicted RBP21.31■■□□□ 1
PTPN4-207ENST00000460162 NFAM1Q8NET5 270 aaPredicted RBP21.31■■□□□ 1
PTPN4-207ENST00000460162 CCT6BQ92526 530 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 MS4A6EQ96DS6 147 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 PHACTR1Q9C0D0 580 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 DPH5Q9H2P9 285 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 SAYSD1Q9NPB0 183 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 DNAJC11Q9NVH1 559 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 MTO1Q9Y2Z2 717 aaKnown RBP21.31■■□□□ 1
PTPN4-207ENST00000460162 CREBBPQ92793 2442 aa21.31■■□□□ 1
PTPN4-207ENST00000460162 TCRBV9S1A1TA0A576 114 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 LRIT2A6NDA9 550 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 SYNDIG1LA6NDD5 238 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 FCHO1O14526 889 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 PHGDHO43175 533 aaKnown RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 CD1DP15813 335 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 STMN1P16949 149 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 HNRNPH1P31943 449 aaKnown RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 TRHRP34981 398 aaPredicted RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 GP5P40197 560 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 CYB561P49447 251 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 ST13P50502 369 aaKnown RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 ADPRMQ3LIE5 342 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 CYS1Q717R9 158 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 MAATS1Q7Z4T9 603 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 GPSM1Q86YR5 675 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 B3GNT7Q8NFL0 401 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 MARVELD3Q96A59 401 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 UNKQ9C0B0 810 aaKnown RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 SH3BGRL2Q9UJC5 107 aa21.3■■□□□ 1
PTPN4-207ENST00000460162 MRPS33Q9Y291 106 aaKnown RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 NCOA6Q14686 2063 aaPredicted RBP21.3■■□□□ 1
PTPN4-207ENST00000460162 ANKDD1BA6NHY2 528 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 FAM159BA6NKW6 160 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 CXorf49A8MYA2 514 aaPredicted RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 CLGNO14967 610 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 TAPBPO15533 448 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 B3GALT2O43825 422 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 GSTA2P09210 222 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 CCDC166P0CW27 439 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 HSD17B7P56937 341 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 RAB38P57729 211 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 MRPS25P82663 173 aaKnown RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 ZKSCAN8Q15776 578 aaPredicted RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 ZNF468Q5VIY5 522 aaPredicted RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 SULT1C3Q6IMI6 304 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 TRIM40Q6P9F5 258 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 BNC2Q6ZN30 1099 aaPredicted RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 Q6ZPB1 254 aaPredicted RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 SIAH3Q8IW03 269 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 APCDD1LQ8NCL9 501 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 PDPRQ8NCN5 879 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 SPATA4Q8NEY3 305 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 OR2L5Q8NG80 312 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 TMEM125Q96AQ2 219 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 WDR34Q96EX3 536 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 DEFB126Q9BYW3 111 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 PPIEQ9UNP9 301 aaKnown RBP21.29■■□□□ 1
PTPN4-207ENST00000460162 ZNF835Q9Y2P0 537 aa21.29■■□□□ 1
PTPN4-207ENST00000460162 ARHGAP10A1A4S6 786 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 RAD51CO43502 376 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 STK16O75716 305 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 MYO1DO94832 1006 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms