RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TRBC2A0A5B9 178 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 TCP11X1B4DZS4 312 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 H0YIV9 168 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 AZIN1O14977 448 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 FLNBO75369 2602 aaKnown RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 ALAS2P22557 587 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 CD97P48960 835 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 PGDP52209 483 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 VSX2P58304 361 aaPredicted RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 SNRPNP63162 240 aaKnown RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 SLBPQ14493 270 aaKnown RBP eCLIP14.79□□□□□ -0.04
SDF4-204ENST00000459994 C10orf62Q5T681 223 aaPredicted RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 TTC19Q6DKK2 380 aaPredicted RBP14.79□□□□□ -0.04
SDF4-204ENST00000459994 SHISA6Q6ZSJ9 500 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 PPP1R32Q7Z5V6 425 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 CRLF3Q8IUI8 442 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 LAS2Q8IYD9 372 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 CLYBLQ8N0X4 340 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 TBC1D19Q8N5T2 526 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 THAP11Q96EK4 314 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 ZNF285Q96NJ3 590 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 NDC1Q9BTX1 674 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 MFRPQ9BY79 579 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 SHCBP1LQ9BZQ2 653 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 TNFRSF12AQ9NP84 129 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 SLCO1B3Q9NPD5 702 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 TXLNGQ9NUQ3 528 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 NDOR1Q9UHB4 597 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 SRPK3Q9UPE1 567 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 PCDHGA11Q9Y5H2 935 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 FLNCQ14315 2725 aa14.79□□□□□ -0.04
SDF4-204ENST00000459994 EDF1O60869 148 aaKnown RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 UROSP10746 265 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 EZRP15311 586 aaKnown RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 GSTM2P28161 218 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 FOLR3P41439 243 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 SCTRP47872 440 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 OR1D4P47884 311 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 UQCRFS1P47985 274 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 RPL14P50914 215 aaKnown RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 HK2P52789 917 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 ZNF33BQ06732 778 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 SSPNQ14714 243 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 CPSF6Q16630 551 aaKnown RBP eCLIP14.78□□□□□ -0.04
SDF4-204ENST00000459994 SH2D4BQ5SQS7 431 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 KANK2Q63ZY3 851 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 MED27Q6P2C8 311 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 FBXO42Q6P3S6 717 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 TMIGD1Q6UXZ0 262 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 ADCK2Q7Z695 626 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 RBMXL3Q8N7X1 1067 aaKnown RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 CDYL2Q8N8U2 506 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 Q8NA96 180 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 OR2Y1Q8NGV0 311 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 METTL6Q8TCB7 284 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 REPS1Q96D71 796 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 SEC16BQ96JE7 1060 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 FAR2Q96K12 515 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 ZNF317Q96PQ6 595 aaPredicted RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 SPNS1Q9H2V7 528 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 RHBGQ9H310 441 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 CTSFQ9UBX1 484 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 GPN3Q9UHW5 284 aaPredicted RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 ZNF490Q9ULM2 529 aaPredicted RBP14.78□□□□□ -0.04
SDF4-204ENST00000459994 SNX6Q9UNH7 406 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 MAU2Q9Y6X3 613 aa14.78□□□□□ -0.04
SDF4-204ENST00000459994 A0A1B0GX78 115 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 HAT1O14929 419 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 DSCR3O14972 297 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 CRCPO75575 148 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 SORBS2O94875 1100 aaKnown RBP14.77□□□□□ -0.05
SDF4-204ENST00000459994 KRT6AP02538 564 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 KRT6BP04259 564 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 HMOX2P30519 316 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 SERPINB1P30740 379 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 LSP1P33241 339 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 AHRP35869 848 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 KRT6CP48668 564 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 RPS15AP62244 130 aaKnown RBP14.77□□□□□ -0.05
SDF4-204ENST00000459994 GNGT1P63211 74 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 UGT3A2Q3SY77 523 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 ZC3H12BQ5HYM0 836 aaKnown RBP14.77□□□□□ -0.05
SDF4-204ENST00000459994 WASHC2DQ5SRD0 308 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 FRG2Q64ET8 278 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 RNF165Q6ZSG1 346 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 FAM47EQ6ZV65 393 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 MED25Q71SY5 747 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 RNF44Q7L0R7 432 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 RAB43Q86YS6 212 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 SHISA5Q8N114 240 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 AMER2Q8N7J2 671 aa14.77□□□□□ -0.05
SDF4-204ENST00000459994 TMEM102Q8N9M5 508 aaPredicted RBP14.77□□□□□ -0.05
SDF4-204ENST00000459994 MFSD9Q8NBP5 474 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms