RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 WWOXQ9NZC7 414 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 NUDT4Q9NZJ9 180 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.4□□□□□ -0.95e-7■■□□□ 13
HDLBP-228ENST00000459788 CELSR2Q9HCU4 2923 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 A0A087X1B8 175 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SAGE2PA6NJ88 616 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SYCE1LA8MT33 242 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CXorf49A8MYA2 514 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TAPBPO15533 448 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 B3GALT2O43825 422 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 KERAO60938 352 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 STATHP02808 62 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 LTA4HP09960 611 aaKnown RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CD46P15529 392 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TRHRP34981 398 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 PHBP35232 272 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 PGGT1BP53609 377 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 RAB38P57729 211 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 C2orf54Q08AI8 447 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.917e-9■□□□□ 9
HDLBP-228ENST00000459788 WHAMMP3Q1A5X7 153 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TMEM35AQ53FP2 167 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 KRTCAP3Q53RY4 240 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 ZNF766Q5HY98 468 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TOR1AIP1Q5JTV8 583 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TRIM40Q6P9F5 258 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 ZDHHC24Q6UX98 284 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SYT10Q6XYQ8 523 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TBC1D1Q86TI0 1168 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CTAGE3PQ8IX95 158 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CA13Q8N1Q1 262 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 OR5T3Q8NGG3 340 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SCMH1Q96GD3 660 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 MAGEB10Q96LZ2 347 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TAAR6Q96RI8 345 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 SERINC2Q96SA4 455 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 TMEM79Q9BSE2 394 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 FUT8Q9BYC5 575 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CD244Q9BZW8 370 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 PLA2G3Q9NZ20 509 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CD274Q9NZQ7 290 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 RNF112Q9ULX5 631 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 ACOT9Q9Y305 439 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 DNAJC13O75165 2243 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 CACNA1CQ13936 2221 aa9.39□□□□□ -0.91
HDLBP-228ENST00000459788 ASPDHA6ND91 283 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 ZNF860A6NHJ4 632 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 A8MUI8 341 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 FCHO1O14526 889 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 PHGDHO43175 533 aaKnown RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 UGDHO60701 494 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 SCELO95171 688 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 CELA2AP08217 269 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 SLC35E2BP0CK96 405 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TFEBP19484 476 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 KCNC1P48547 511 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 MTTPP55157 894 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 RAB8AP61006 207 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 RBPJQ06330 500 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TUBA3CQ13748 450 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 OR4D1Q15615 310 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 XKR6Q5GH73 641 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TUBA3EQ6PEY2 450 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 CAPN12Q6ZSI9 719 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 ISCA2Q86U28 154 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 RPS19BP1Q86WX3 136 aaKnown RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 CRLF3Q8IUI8 442 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 SCUBE1Q8IWY4 988 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 LAS2Q8IYD9 372 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 BEST3Q8N1M1 668 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 PPM1NQ8N819 430 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 POGLUT1Q8NBL1 392 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 MNS1Q8NEH6 495 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 NFAM1Q8NET5 270 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 FBF1Q8TES7 1133 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TSLPQ969D9 159 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 QRFPRQ96P65 431 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 KCNC2Q96PR1 638 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 ATOH8Q96SQ7 321 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TBCDQ9BTW9 1192 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 KLHL31Q9H511 634 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 LYRM4Q9HD34 91 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 ZDHHC18Q9NUE0 388 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
HDLBP-228ENST00000459788 TMCO1Q9UM00 188 aa9.38□□□□□ -0.91
HDLBP-228ENST00000459788 IGHV3-20A0A0C4DH32 117 aa9.37□□□□□ -0.91
HDLBP-228ENST00000459788 GABRR3A8MPY1 467 aa9.37□□□□□ -0.91
HDLBP-228ENST00000459788 K7EPI3 171 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms