RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 APIPQ96GX9 242 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CNDP2Q96KP4 475 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM74Q96NL1 305 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CDRT15Q96T59 188 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 NPAS2Q99743 824 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 MAP3K3Q99759 626 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SARGQ9BW04 601 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 NPLQ9BXD5 320 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 MS4A8Q9BY19 250 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 BHLHE41Q9C0J9 482 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 VCX3BQ9H321 246 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 MUC13Q9H3R2 512 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 YY1AP1Q9H869 796 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TNFRSF12AQ9NP84 129 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC6A20Q9NP91 592 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 MYNNQ9NPC7 610 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM9BQ9NQ34 198 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 UCKL1Q9NWZ5 548 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SIRT5Q9NXA8 310 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 THUMPD1Q9NXG2 353 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPHK1Q9NYA1 384 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TAS2R1Q9NYW7 299 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF282Q9UDV7 671 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 FBXW2Q9UKT8 454 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 BAG5Q9UL15 447 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SRPK3Q9UPE1 567 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 DLGAP4Q9Y2H0 992 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PCDHGB2Q9Y5G2 931 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC22A7Q9Y694 548 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 RNF215Q9Y6U7 377 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CHD9Q3L8U1 2897 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CHD7Q9P2D1 2997 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 IGHV1OR21-1A0A087WYE8 117 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRAMEF33A0A0G2JMD5 474 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A1B0GTL3 188 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A1W2PRB8 838 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 HYKKA2RU49 373 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 EME2A4GXA9 379 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM150CB9EJG8 249 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 C5orf58C9J3I9 102 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 H0YGG7 62 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RNASET2O00584 256 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PLPP1O14494 284 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SCAMP2O15127 329 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PDPK1O15530 556 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 LCMT2O60294 686 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ERAL1O75616 437 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RPLP0P05388 317 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLK3P07288 261 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 GP1BAP07359 652 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ABCB1P08183 1280 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CD63P08962 238 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ALDOCP09972 364 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF806P0C7X5 589 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF888P0CJ79 500 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 NR2F6P10588 404 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CKMT1AP12532 417 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RNH1P13489 461 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SDC1P18827 310 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CSNK2A2P19784 350 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CD22P20273 847 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 DDCP20711 480 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 AGXTP21549 392 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 IL10P22301 178 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 HIST1H1TP22492 207 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SOAT1P35610 550 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 BCL6P41182 706 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MAPK10P53779 464 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ITGA1P56199 1179 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RAB8AP61006 207 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ARF3P61204 181 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 NCALDP61601 193 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 AP2B1P63010 937 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TXNL4AP83876 142 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRR5P85299 388 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC25A3Q00325 362 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 OCA2Q04671 838 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLC1Q07866 573 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 STX4Q12846 297 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 BNIP2Q12982 314 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRA2AQ13595 282 aaKnown RBP eCLIP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RCAN2Q14206 197 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 FLOT2Q14254 428 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PTGR1Q14914 329 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CYP51A1Q16850 503 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 DEFB134Q4QY38 66 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCDC157Q569K6 752 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MFSD4BQ5TF39 518 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF425Q6IV72 752 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ERICH5Q6P6B1 374 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RIPOR1Q6ZS17 1223 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SZRD1Q7Z422 152 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 NET1Q7Z628 596 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPRED1Q7Z699 444 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 DHDDSQ86SQ9 333 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRIM73Q86UV7 250 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 IFNEQ86WN2 208 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PROSER1Q86XN7 944 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PLD3Q8IV08 490 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC35F3Q8IY50 421 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms