RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CYSRT1A8MQ03 144 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 SCAMP2O15127 329 aaKnown RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 DFNA5O60443 496 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 FKBP6O75344 327 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ERN1O75460 977 aaKnown RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 ATP6V1G2O95670 118 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 EML2O95834 649 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 TGFB1P01137 390 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 MAOBP27338 520 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 FASLGP48023 281 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 TRA2BP62995 288 aaKnown RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 MEF2AQ02078 507 aaPredicted RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 BNIP2Q12982 314 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 PWP1Q13610 501 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 DUOXA1Q1HG43 343 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ZNF542PQ5EBM4 170 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 PIGGQ5H8A4 983 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 DEPDC1Q5TB30 811 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 FAM219BQ5XKK7 198 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ZNF425Q6IV72 752 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 PGM2L1Q6PCE3 622 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 SPESP1Q6UW49 350 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 CAMKMTQ7Z624 323 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 NAGSQ8N159 534 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 TMEM132CQ8N3T6 1108 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 MFSD9Q8NBP5 474 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ZNF548Q8NEK5 533 aaPredicted RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 TNIP2Q8NFZ5 429 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 OR8J3Q8NGG0 315 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 OR10G6Q8NH81 332 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 CDC26Q8NHZ8 85 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 CEP76Q8TAP6 659 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ZUFSPQ96AP4 578 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 CCDC124Q96CT7 223 aaKnown RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 LRRC58Q96CX6 371 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 C11orf24Q96F05 449 aaPredicted RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 CDRT15Q96T59 188 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 NLNQ9BYT8 704 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ROGDIQ9GZN7 287 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 EPB41L1Q9H4G0 881 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 ACTL8Q9H568 366 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 DCLRE1BQ9H816 532 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 SLC6A20Q9NP91 592 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 SLC7A8Q9UHI5 535 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 BAIAP2L1Q9UHR4 511 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 DLGAP4Q9Y2H0 992 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 RAXQ9Y2V3 346 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 PCDHGA7Q9Y5G6 932 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 KLK4Q9Y5K2 254 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 AP1M2Q9Y6Q5 423 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 GOLGA4Q13439 2230 aaKnown RBP8.54□□□□□ -1.04
VPS50-207ENST00000458530 TRBV23OR9-2A0A075B6M9 112 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 A0A096LPI6 279 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 OR5K3A6NET4 321 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 HAT1O14929 419 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TNFSF14O43557 240 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 GMNNO75496 209 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 PIAS2O75928 621 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 PDE5AO76074 875 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ANP32DO95626 131 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 SERPIND1P05546 499 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 SLC35G6P0C7Q6 338 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 FTH1P19P0C7X4 201 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ALPPL2P10696 532 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 UGT2B7P16662 529 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 POLR2CP19387 275 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 PPIBP23284 216 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 IL12AP29459 219 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 PEBP1P30086 187 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 ZFP36L2P47974 494 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 TRPC1P48995 793 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 SLC7A2P52569 658 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 MAPK12P53778 367 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 EPHA4P54764 986 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 EEFSECP57772 596 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 ACTR3P61158 418 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 AP2B1P63010 937 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 CYP4F2P78329 520 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TRAP1Q12931 704 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 C1orf61Q13536 156 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 FLOT2Q14254 428 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 KPNB1Q14974 876 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 HEPACAMQ14CZ8 416 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TLR1Q15399 786 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TRIP6Q15654 476 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 SPANXN4Q5MJ08 99 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 C6orf10Q5SRN2 563 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 CCNYL2Q5T2Q4 361 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 CPTPQ5TA50 214 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 FBXW10Q5XX13 1052 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 C8orf82Q6P1X6 216 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 TRIM40Q6P9F5 258 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 AAGABQ6PD74 315 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 LAYNQ6UX15 382 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 RIPOR1Q6ZS17 1223 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms