RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ISL2Q96A47 359 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 OR1F2PQ96R84 312 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 ZNF700Q9H0M5 742 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 IPPKQ9H8X2 491 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 LANCL2Q9NS86 450 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 C5AR2Q9P296 337 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 PLAAQ9Y263 795 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 BAHCC1Q9P281 2608 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 A8MUI8 341 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 FOXO6A8MYZ6 492 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 PRMT3O60678 531 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 SHBGP04278 402 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 MAOAP21397 527 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 GSTM2P28161 218 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 RAP1GDS1P52306 607 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 RHAGQ02094 409 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 TGM3Q08188 693 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 RUNX2Q13950 521 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 CPSF6Q16630 551 aaKnown RBP eCLIP17.59■□□□□ 0.41
USP39-209ENST00000458268 B3GNTL1Q67FW5 361 aaPredicted RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 GRHL2Q6ISB3 625 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 PAPD4Q6PIY7 484 aaKnown RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 MTBPQ96DY7 904 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 WDR34Q96EX3 536 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 CDK15Q96Q40 435 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 MTERF1Q99551 399 aaKnown RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 TUBB6Q9BUF5 446 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 TXLNGYQ9BZA5 131 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 PITHD1Q9GZP4 211 aaPredicted RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 MRPL46Q9H2W6 279 aaKnown RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 EPB41L4BQ9H329 900 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 NOL11Q9H8H0 719 aaKnown RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 ANKZF1Q9H8Y5 726 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 TNPO3Q9Y5L0 923 aaKnown RBP17.59■□□□□ 0.41
USP39-209ENST00000458268 CSAG2Q9Y5P2 127 aa17.59■□□□□ 0.41
USP39-209ENST00000458268 LOC102723996A0A087X1L8 192 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 PCDH17O14917 1159 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 WISP1O95388 367 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 SERPINA7P05543 415 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 SMIM10L1P0DMW3 83 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 COL6A2P12110 1019 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 TSPAN8P19075 237 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 HPDP32754 393 aaPredicted RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 SSR2P43308 183 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 ST13P50502 369 aaKnown RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 CCNG1P51959 295 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 SOX8P57073 446 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 PCBP2Q15366 365 aaKnown RBP eCLIP17.58■□□□□ 0.4
USP39-209ENST00000458268 TBCCQ15814 346 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 FCRLBQ6BAA4 426 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 ISLR2Q6UXK2 745 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 CLNKQ7Z7G1 428 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 OR7G3Q8NG95 312 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 CPT1CQ8TCG5 803 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 ZNF473Q8WTR7 871 aaKnown RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 MTFMTQ96DP5 389 aaKnown RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 SMIM10Q96HG1 83 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 NSUN5Q96P11 429 aaKnown RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 MRPL57Q9BQC6 102 aaKnown RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 MS4A8Q9BY19 250 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 OR51B5Q9H339 312 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 SEMA4BQ9NPR2 832 aaPredicted RBP17.58■□□□□ 0.4
USP39-209ENST00000458268 PLA2G3Q9NZ20 509 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.4
USP39-209ENST00000458268 MYOCOSA0A1B0GUC4 107 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 CCDC189A1A4V9 331 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 MAGEB17A8MXT2 336 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 KLK8O60259 260 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 TBX6O95947 436 aaPredicted RBP17.57■□□□□ 0.4
USP39-209ENST00000458268 PYGBP11216 843 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 KRT15P19012 456 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 IL10P22301 178 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 MTTPP55157 894 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 ARG2P78540 354 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 PHEXP78562 749 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 ZNF33BQ06732 778 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 PLEKHN1Q494U1 663 aaPredicted RBP17.57■□□□□ 0.4
USP39-209ENST00000458268 TTC19Q6DKK2 380 aaPredicted RBP17.57■□□□□ 0.4
USP39-209ENST00000458268 ABHD17CQ6PCB6 329 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 HPS6Q86YV9 775 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 ARMC2Q8NEN0 867 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 HUS1BQ8NHY5 278 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 DNAJB14Q8TBM8 379 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 PPP4R1Q8TF05 950 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 PNPLA2Q96AD5 504 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 LPAR4Q99677 370 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 WDR77Q9BQA1 342 aaPredicted RBP17.57■□□□□ 0.4
USP39-209ENST00000458268 SORBS1Q9BX66 1292 aaKnown RBP17.57■□□□□ 0.4
USP39-209ENST00000458268 KCNK13Q9HB14 408 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 TMEM216Q9P0N5 145 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 COPG2Q9UBF2 871 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 FBXW2Q9UKT8 454 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 TMCO1Q9UM00 188 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 B3GNT3Q9Y2A9 372 aa17.57■□□□□ 0.4
USP39-209ENST00000458268 BSNQ9UPA5 3926 aa17.56■□□□□ 0.4
USP39-209ENST00000458268 E2F3O00716 465 aa17.56■□□□□ 0.4
USP39-209ENST00000458268 SLU7O95391 586 aaKnown RBP17.56■□□□□ 0.4
USP39-209ENST00000458268 TAC1P20366 129 aa17.56■□□□□ 0.4
USP39-209ENST00000458268 CASP2P42575 452 aa17.56■□□□□ 0.4
USP39-209ENST00000458268 NEK2P51955 445 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms