RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RBBP5Q15291 538 aaKnown RBP20.11■□□□□ 0.81
CPNE1-220ENST00000458038 SBSNQ6UWP8 590 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 PDIK1LQ8N165 341 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 NKAPQ8N5F7 415 aaKnown RBP20.11■□□□□ 0.81
CPNE1-220ENST00000458038 APCDD1LQ8NCL9 501 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 SDCCAG3Q96C92 435 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 LRRC39Q96DD0 335 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 SEC16BQ96JE7 1060 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 TSNARE1Q96NA8 513 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 NPLQ9BXD5 320 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-220ENST00000458038 SPNS1Q9H2V7 528 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 PPIEQ9UNP9 301 aaKnown RBP20.11■□□□□ 0.81
CPNE1-220ENST00000458038 CLDN4O14493 209 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 FANCGO15287 622 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 PEX1O43933 1283 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 H2AFYO75367 372 aaKnown RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 HPDP32754 393 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 HNF4AP41235 474 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 HSD17B7P56937 341 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 HSF1Q00613 529 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 FRG1Q14331 258 aaKnown RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 PPP1R3AQ16821 1122 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 MSS51Q4VC12 460 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 SULF2Q8IWU5 870 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 CYP4Z2PQ8N1L4 340 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 ZFP62Q8NB50 900 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 CREB3L4Q8TEY5 395 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 ASB5Q8WWX0 329 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 SLCO2A1Q92959 643 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 FAR2Q96K12 515 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 OSBPL9Q96SU4 736 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 TREX2Q9BQ50 279 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 CCDC77Q9BR77 488 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 RHBGQ9H310 441 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 MCCC2Q9HCC0 563 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 NECTIN3Q9NQS3 549 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 SLC22A14Q9Y267 594 aa20.1■□□□□ 0.81
CPNE1-220ENST00000458038 YARS2Q9Y2Z4 477 aaKnown RBP20.1■□□□□ 0.81
CPNE1-220ENST00000458038 A0A088AWK7 358 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 TRBV11-1A0A0K0K1C0 115 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 GNAZP19086 355 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 ZNF10P21506 573 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-220ENST00000458038 PTGER1P34995 402 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 ILF2Q12905 390 aaKnown RBP20.09■□□□□ 0.81
CPNE1-220ENST00000458038 TOR1AIP1Q5JTV8 583 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 PAOXQ6QHF9 649 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 FGD2Q7Z6J4 655 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 TMPRSS11BQ86T26 416 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 IGDCC3Q8IVU1 814 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 GPALPP1Q8IXQ4 340 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 CA13Q8N1Q1 262 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 GAL3ST3Q96A11 431 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 VMP1Q96GC9 406 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 CAPS2Q9BXY5 557 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 PITHD1Q9GZP4 211 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-220ENST00000458038 KLHL31Q9H511 634 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 TIMMDC1Q9NPL8 285 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 MRPS33Q9Y291 106 aaKnown RBP20.09■□□□□ 0.81
CPNE1-220ENST00000458038 AKAP9Q99996 3911 aa20.09■□□□□ 0.81
CPNE1-220ENST00000458038 PHF3Q92576 2039 aaKnown RBP20.09■□□□□ 0.81
CPNE1-220ENST00000458038 MTORP42345 2549 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 A0A1B0GTH9 108 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 USP27XA6NNY8 438 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 A8MUA0 341 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 BANF1O75531 89 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 MYO1DO94832 1006 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 TPOP07202 933 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 ZNF37AP17032 561 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-220ENST00000458038 TFEBP19484 476 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 BTN3A2P78410 334 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 MORF4L2Q15014 288 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 ARHGAP11AQ6P4F7 1023 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 C3P1Q6ZMU1 363 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 MEX3BQ6ZN04 569 aaKnown RBP20.08■□□□□ 0.81
CPNE1-220ENST00000458038 SCUBE1Q8IWY4 988 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 TP63Q9H3D4 680 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-220ENST00000458038 PLSCR2Q9NRY7 297 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 ITGB1BP2Q9UKP3 347 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 FBXW2Q9UKT8 454 aa20.08■□□□□ 0.81
CPNE1-220ENST00000458038 FOXO6A8MYZ6 492 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 ITGA10O75578 1167 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 TUBB4AP04350 444 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 C1GALT1C1LP0DN25 315 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 ELK3P41970 407 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 SSR4P51571 173 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 TLE4Q04727 773 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 RCN2Q14257 317 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 STEAP4Q687X5 459 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 TMIGD1Q6UXZ0 262 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 NCCRP1Q6ZVX7 275 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-220ENST00000458038 ADAMTSL2Q86TH1 951 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 CD163Q86VB7 1156 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 ZNF595Q8IYB9 648 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 KRT78Q8N1N4 520 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 PDLIM2Q96JY6 352 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 NT5DC2Q9H857 520 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 PNO1Q9NRX1 252 aaKnown RBP20.07■□□□□ 0.8
CPNE1-220ENST00000458038 OARD1Q9Y530 152 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 HCFC1P51610 2035 aa20.07■□□□□ 0.8
CPNE1-220ENST00000458038 ZFAND5O76080 213 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms