RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SLC18A2Q05940 514 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZRSR2Q15696 482 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 KRT71Q3SY84 523 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 CCDC153Q494R4 210 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MINDY4Q4G0A6 757 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 SOWAHCQ53LP3 525 aaPredicted RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZNF678Q5SXM1 525 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 CPZQ66K79 652 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 METTL2BQ6P1Q9 378 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 TRIM40Q6P9F5 258 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MILR1Q7Z6M3 343 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MRGPREQ86SM8 312 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TRABD2AQ86V40 505 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 SLC22A9Q8IVM8 553 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZC3H7AQ8IWR0 971 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 SRRM1Q8IYB3 904 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 LAS2Q8IYD9 372 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 OR7G3Q8NG95 312 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 OR4F6Q8NGB9 312 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 OR52B6Q8NGF0 335 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TRPC4APQ8TEL6 797 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZNF483Q8TF39 744 aaPredicted RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 GAL3ST3Q96A11 431 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 WBP1Q96G27 269 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 IP6K3Q96PC2 410 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ZIM3Q96PE6 472 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TMEM237Q96Q45 408 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 NTMT1Q9BV86 223 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TGIF2Q9GZN2 237 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 REXO4Q9GZR2 422 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 ING2Q9H160 280 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 SEMA3GQ9NS98 782 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 P4HTMQ9NXG6 502 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 LGALS13Q9UHV8 139 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 OR2W5A6NFC9 320 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 A6NL46 340 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 G3V2L1 256 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 SAP18O00422 153 aaKnown RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 SOCS6O14544 535 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 PLIN3O60664 434 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 UGDHO60701 494 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 ALOX12BO75342 701 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CDC123O75794 336 aaPredicted RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 OR4F21O95013 312 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 PRB1P04280 392 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 HPDP32754 393 aaPredicted RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 NEK2P51955 445 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 PRKAA2P54646 552 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 RRADP55042 308 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 RPS13P62277 151 aaKnown RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 HERVK_113P63132 956 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 SKP1P63208 163 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 PHEXP78562 749 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 KCNAB2Q13303 367 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 RUNX2Q13950 521 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 TLR1Q15399 786 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 TUBB8Q3ZCM7 444 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CEP85LQ5SZL2 805 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 NIPAL1Q6NVV3 410 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 ZYG11AQ6WRX3 759 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CHSY3Q70JA7 882 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 MED25Q71SY5 747 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 APLFQ8IW19 511 aaPredicted RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 CA13Q8N1Q1 262 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CCNYL1Q8N7R7 359 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 TMEM102Q8N9M5 508 aaPredicted RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 L3MBTL4Q8NA19 623 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 OR2L5Q8NG80 312 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 HUS1BQ8NHY5 278 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 C8orf44Q96CB5 159 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 REPS1Q96D71 796 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CMTM7Q96FZ5 175 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 SEC16BQ96JE7 1060 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 FER1L6-AS2Q96M78 137 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 MTERF1Q99551 399 aaKnown RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 MESP1Q9BRJ9 268 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 C1QTNF3Q9BXJ4 246 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 ERVK-6Q9BXR3 956 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 MS4A8Q9BY19 250 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 SEMA4CQ9C0C4 833 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 IQCGQ9H095 443 aaKnown RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 OR51B5Q9H339 312 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 CENPHQ9H3R5 247 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 COPS7BQ9H9Q2 264 aaPredicted RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 ADGRE2Q9UHX3 823 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.89
RFX3-210ENST00000457373 TNRC6AQ8NDV7 1962 aaKnown RBP9.52□□□□□ -0.89
RFX3-210ENST00000457373 MED13Q9UHV7 2174 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 A0A088AWK7 358 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 A0A1B0GTL3 188 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 MAGEB17A8MXT2 336 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 FAM227AF5H4B4 570 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 H0YIV9 168 aa9.51□□□□□ -0.89
RFX3-210ENST00000457373 MKRN2OSH3BPM6 223 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms