RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 DPPA4Q7L190 304 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 FAM124AQ86V42 546 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 HEATR4Q86WZ0 1026 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SETD9Q8NE22 299 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SPPL2AQ8TCT8 520 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 UBTD2Q8WUN7 234 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 FEVQ99581 238 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 APOL4Q9BPW4 351 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 NIPSNAP1Q9BPW8 284 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 PSD2Q9BQI7 771 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 PBX4Q9BYU1 374 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 RMND5AQ9H871 391 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 REEP1Q9H902 201 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 TMEM45AQ9NWC5 275 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 MAN2B2Q9Y2E5 1009 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SPEGQ15772 3267 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 CXorf51AA0A1B0GTR3 108 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 MAGEB17A8MXT2 336 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 EVPLLA8MZ36 301 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 HOXC11O43248 304 aaPredicted RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PCDH7O60245 1069 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 SCN2BO60939 215 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 FPR1P21462 350 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 CHIT1Q13231 466 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TSTA3Q13630 321 aaPredicted RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 HKDC1Q2TB90 917 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 ZC3H12BQ5HYM0 836 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 COX20Q5RI15 118 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 UBE2UQ5VVX9 321 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 NXNL2Q5VZ03 156 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TRAM1L1Q8N609 369 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 OR9Q2Q8NGE9 314 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 SMARCD2Q92925 531 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 MED8Q96G25 268 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PLA2G2FQ9BZM2 168 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 OR2AG1Q9H205 316 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TP63Q9H3D4 680 aaPredicted RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RMI1Q9H9A7 625 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RHCGQ9UBD6 479 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RWDD3Q9Y3V2 267 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PCM1Q15154 2024 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 TSPAN11A1L157 253 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 SAP18O00422 153 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 GCM2O75603 506 aaPredicted RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PTHP01270 115 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RB1P06400 928 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PFN3P60673 137 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 KEAP1Q14145 624 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RFX4Q33E94 735 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 IQCCQ4KMZ1 466 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 ZDHHC20Q5W0Z9 365 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 OR4K1Q8NGD4 311 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 UTP15Q8TED0 518 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 PHF10Q8WUB8 498 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 ASZ1Q8WWH4 475 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 S100ZQ8WXG8 99 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 NELL1Q92832 810 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 FAM83CQ9BQN1 747 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
LINC00959-201ENST00000456581 FZD4Q9ULV1 537 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 SNX8Q9Y5X2 465 aa11.91□□□□□ -0.5
LINC00959-201ENST00000456581 E7EQ34 232 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 CTDSP2O14595 271 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 EPN2O95208 641 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SEMG1P04279 462 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ALOX12P18054 663 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 IL12RB1P42701 662 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SLC6A12P48065 614 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SERPINB10P48595 397 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 KCNJ10P78508 379 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 IL18R1Q13478 541 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 NAE1Q13564 534 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 TIGD6Q17RP2 521 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 DUOXA1Q1HG43 343 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ARMC8Q8IUR7 673 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 NAGSQ8N159 534 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ATL1Q8WXF7 558 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 CDADC1Q9BWV3 514 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 TPT1P8Q9HAU6 139 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ERVK13-1Q9NX77 482 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 PRAMEF25A6NGN4 478 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SLC16A8O95907 504 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 C8GP07360 202 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SRPRAP08240 638 aaKnown RBP11.9□□□□□ -0.5
LINC00959-201ENST00000456581 DCDC1P59894 354 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 GANABQ14697 944 aaKnown RBP11.9□□□□□ -0.5
LINC00959-201ENST00000456581 HNRNPA1L2Q32P51 320 aaKnown RBP11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SYTL3Q4VX76 610 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms