RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TNFRSF8P28908 595 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 OR4D2P58180 307 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 Q0VFX4 171 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 RCN2Q14257 317 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 PCOLCEQ15113 449 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 BTBD16Q32M84 506 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 GRHL2Q6ISB3 625 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 JMJD6Q6NYC1 403 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 METTL2BQ6P1Q9 378 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 ISLR2Q6UXK2 745 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 LINC00696Q6ZRV3 163 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 RIPOR1Q6ZS17 1223 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 GOLGA7Q7Z5G4 137 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SHISA5Q8N114 240 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 CA13Q8N1Q1 262 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 EFCAB3Q8N7B9 438 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 OR7G3Q8NG95 312 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 CMTM7Q96FZ5 175 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SERINC2Q96SA4 455 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 ROGDIQ9GZN7 287 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 ILKAPQ9H0C8 392 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 LANCL2Q9NS86 450 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 LUZP4Q9P127 313 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 PTGFRNQ9P2B2 879 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 MAGEB17A8MXT2 336 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 FAM227AF5H4B4 570 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 STX16-NPEPL1H3BU86 382 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 GOLGA8RI6L899 631 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 CLDN4O14493 209 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 STX16O14662 325 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 CCNG1P51959 295 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 MTTPP55157 894 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 MLLT10P55197 1068 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 RHAGQ02094 409 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 KCNC4Q03721 635 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 TMEM35AQ53FP2 167 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 SFT2D3Q587I9 215 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 CRB2Q5IJ48 1285 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 TTC19Q6DKK2 380 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 ADNP2Q6IQ32 1131 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 VN1R5Q7Z5H4 357 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 LAS2Q8IYD9 372 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF473Q8WTR7 871 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 PNPLA2Q96AD5 504 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 KCNC2Q96PR1 638 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 LPAR4Q99677 370 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 NOL11Q9H8H0 719 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 MRPS33Q9Y291 106 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
PDLIM2-215ENST00000456545 A0A1W2PQ72 361 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 SMIM23A6NLE4 172 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 A8MUI8 341 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 E2F3O00716 465 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 UGDHO60701 494 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 WISP1O95388 367 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 CLDN9O95484 217 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 KRT15P19012 456 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 RAP1GDS1P52306 607 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 BTG2P78543 158 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 PCDH1Q08174 1060 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 RUNX2Q13950 521 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 EXT1Q16394 746 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 CPSF6Q16630 551 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 SLC6A19Q695T7 634 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 ABHD17CQ6PCB6 329 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 IGFL3Q6UXB1 125 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 LCA5Q86VQ0 697 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 SIRT6Q8N6T7 355 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 BRIX1Q8TDN6 353 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 ACMSDQ8TDX5 336 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 ADAMTS18Q8TE60 1221 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 TSLPQ969D9 159 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 CNDP1Q96KN2 507 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 LMF1Q96S06 567 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 TBCDQ9BTW9 1192 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 MS4A8Q9BY19 250 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 AICDAQ9GZX7 198 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 ANKZF1Q9H8Y5 726 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 ZBTB20Q9HC78 741 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 PRDM9Q9NQV7 894 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 DCDC2Q9UHG0 476 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 TEKT2Q9UIF3 430 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 SPACA6W5XKT8 324 aa17.01■□□□□ 0.31
PDLIM2-215ENST00000456545 DYTNA2CJ06 578 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 ESPNB1AK53 854 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 C4orf51C9J302 202 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 PYGBP11216 843 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 PIK3CBP42338 1070 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 SLCO1A2P46721 670 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 EFNA3P52797 238 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 RAB38P57729 211 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 SLC13A2Q13183 592 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 MFAP5Q13361 173 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 E2F2Q14209 437 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 ADPRMQ3LIE5 342 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms