RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 MUS81Q96NY9 551 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 INTS14Q96SY0 518 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 FERMT1Q9BQL6 677 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC2A11Q9BYW1 496 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 PUS3Q9BZE2 481 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 IL1RAPL2Q9NP60 686 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 ABCB8Q9NUT2 735 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 ANO10Q9NW15 660 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 NINJ2Q9NZG7 142 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 SEPT10Q9P0V9 454 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 ARMCX3Q9UH62 379 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 LIPT1Q9Y234 373 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 SOGA1O94964 1423 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 CEP162Q5TB80 1403 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 SYNRGQ9UMZ2 1314 aa2.93□□□□□ -1.94
R3HDM1-212ENST00000456040 SYNJ1O43426 1573 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CARMIL1Q5VZK9 1371 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 NPIPB9F8W1W9 429 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC1A7O00341 560 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SURF4O15260 269 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 BCL2L11O43521 198 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 VEGFDO43915 354 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ATP6AP2O75787 350 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 POP4O95707 220 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PDGFRAP16234 1089 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PEX19P40855 299 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 RABIFP47224 123 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 LIMK2P53671 638 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CLDN15P56746 228 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC26A5P58743 744 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 DCDC1P59894 354 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 NPRL3Q12980 569 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SRSF9Q13242 221 aaKnown RBP eCLIP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ZNF177Q13360 481 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 NONOQ15233 471 aaKnown RBP eCLIP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 HFEQ30201 348 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ANKRD20A4Q4UJ75 823 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ANKRD20A8PQ5CZ79 823 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 TOR1AIP1Q5JTV8 583 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ANKRD20A2Q5SQ80 823 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ANKRD20A1Q5TYW2 823 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ANKRD20A3Q5VUR7 823 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 KRT39Q6A163 491 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ZCCHC12Q6PEW1 402 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 Q6ZR54 194 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 LINC00696Q6ZRV3 163 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CDHR3Q6ZTQ4 885 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC24A5Q71RS6 500 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PPP1R42Q7Z4L9 355 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SPATA19Q7Z5L4 167 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC47A2Q86VL8 602 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 FAM131BQ86XD5 332 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CNTN4Q8IWV2 1026 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 KLHL7Q8IXQ5 586 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 RCOR2Q8IZ40 523 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 XXYLT1Q8NBI6 393 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SPATA18Q8TC71 538 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ST7LQ8TDW4 575 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CHURC1Q8WUH1 139 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ZNF606Q8WXB4 792 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ROBO4Q8WZ75 1007 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PRCCQ92733 491 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 TOMM40LQ969M1 308 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SYAP1Q96A49 352 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CFAP57Q96MR6 1250 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 BTBD9Q96Q07 612 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SLC25A23Q9BV35 468 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 UTP14AQ9BVJ6 771 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CACNG6Q9BXT2 260 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ABCG8Q9H221 673 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PARLQ9H300 379 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 TUBB1Q9H4B7 451 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 GNB4Q9HAV0 340 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 DNAJC4Q9NNZ3 241 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CTSZQ9UBR2 303 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 PIN4Q9Y237 131 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ZNF510Q9Y2H8 683 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CUX1P39880 1505 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CLIP1P30622 1438 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 SPAG9O60271 1321 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 ATP8B3O60423 1300 aa2.92□□□□□ -1.94
R3HDM1-212ENST00000456040 CUX2O14529 1486 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 ERCC6Q03468 1493 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RAPGEF2Q9Y4G8 1499 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 WDR97A6NE52 1622 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 IGHV4-30-2A0A087WSY4 118 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RNF103-CHMP3A0A140T963 221 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 K7EQD1 137 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RNF103O00237 685 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 AP5Z1O43299 807 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RTN2O75298 545 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 MYOGP15173 224 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 CYP11B2P19099 503 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 PRPHP41219 470 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RAB28P51157 221 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 CASP9P55211 416 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 STARD6P59095 220 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 HTD2P86397 168 aa2.91□□□□□ -1.94
R3HDM1-212ENST00000456040 RBPJQ06330 500 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms