RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 AGPSO00116 658 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RAB3AP20336 220 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PSMB4P28070 264 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 VIPR1P32241 457 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC7A9P82251 487 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CAP1Q01518 475 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PPATQ06203 517 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 VEZF1Q14119 521 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 IKBKEQ14164 716 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 UBXN2BQ14CS0 331 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ARL13AQ5H913 290 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TRAPPC5Q8IUR0 188 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CEP97Q8IW35 865 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CENPSQ8N2Z9 138 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC25A31Q9H0C2 315 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MRPS7Q9Y2R9 242 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CPED1A4D0V7 1026 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 POP4O95707 220 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MBP02144 154 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 HOXA10P31260 410 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RPIAP49247 311 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 STK19P49842 368 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CLCQ05315 142 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ARHGAP1Q07960 439 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ORC1Q13415 861 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 UQCC3Q6UW78 93 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ACOT1Q86TX2 421 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF563Q8TA94 476 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 NEIL3Q8TAT5 605 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC35B2Q8TB61 432 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GPR151Q8TDV0 419 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LINGO1Q96FE5 620 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FCRL5Q96RD9 977 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CUEDC1Q9NWM3 386 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ALPPP05187 535 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MMP10P09238 476 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PRKCHP24723 683 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MAP2K3P46734 347 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF763Q0D2J5 394 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SEPT12Q8IYM1 358 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC25A41Q8N5S1 370 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GAL3ST3Q96A11 431 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FCRL4Q96PJ5 515 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CHRDL1Q9BU40 450 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GPRC5BQ9NZH0 403 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TCAF1Q9Y4C2 921 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GSRP00390 522 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 POU3F3P20264 500 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 NFYAP23511 347 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CNTN2Q02246 1040 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RAB40BQ12829 278 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FIGNL1Q6PIW4 674 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 HPS6Q86YV9 775 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LACC1Q8IV20 430 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC37A3Q8NCC5 494 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 OR2T11Q8NH01 316 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ANGPTL6Q8NI99 470 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZSCAN18Q8TBC5 510 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 METTL21AQ8WXB1 218 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MYRFLQ96LU7 910 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LYSMD1Q96S90 227 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DOHHQ9BU89 302 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC38A1Q9H2H9 487 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TPK1Q9H3S4 243 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DPEP2Q9H4A9 486 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 HMX1Q9NP08 348 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ABCB9Q9NP78 766 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 VPS29Q9UBQ0 182 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GGT7Q9UJ14 662 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PRSS51A0A1B0GVH4 220 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 OR5K4A6NMS3 321 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 INMT-MINDY4F8WBC2 141 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CASRP41180 1078 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DUOXA1Q1HG43 343 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 UBAP2Q5T6F2 1119 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 IRF2BP2Q7Z5L9 587 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC35F3Q8IY50 421 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LGI2Q8N0V4 545 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CPXM2Q8N436 756 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PLD5Q8N7P1 536 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 OR51B5Q9H339 312 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PCDHB10Q9UN67 800 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TFR2Q9UP52 801 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ERVK-19Q9WJR5 959 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TAF1P21675 1872 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LRRC72A6NJI9 287 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA31D3P0C874 917 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 IDSP22304 550 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RXRBP28702 533 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SEPHS1P49903 392 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ARPP19P56211 112 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TGFB2P61812 414 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LSAMPQ13449 338 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 NAA30Q147X3 362 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC39A12Q504Y0 691 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MANEALQ5VSG8 457 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MSANTD2Q6P1R3 559 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA31D4Q6ZUB0 917 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 IQCHQ86VS3 1027 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms