RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PELI2Q9HAT8 420 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 LTB4R2Q9NPC1 389 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 MYNNQ9NPC7 610 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ABCG2Q9UNQ0 655 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 EXO1Q9UQ84 846 aaKnown RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 SLC17A4Q9Y2C5 497 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 RNASET2O00584 256 aaKnown RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 CAPNS1P04632 268 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 CSNK1G2P78368 415 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 FXNQ16595 210 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TRIM40Q6P9F5 258 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLK3-203ENST00000454830 ZCCHC7Q8N3Z6 543 aaKnown RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ZFP90Q8TF47 636 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 FAM3CQ92520 227 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 MUS81Q96NY9 551 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 MS4A8Q9BY19 250 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 SRMSQ9H3Y6 488 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 EXD2Q9NVH0 621 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 KDM1AO60341 852 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 GPR37L1O60883 481 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 PTOV1Q86YD1 416 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 APLFQ8IW19 511 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 COQ8BQ96D53 544 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 TRPC4Q9UBN4 977 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 SH3GLB1Q9Y371 365 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 PDPK1O15530 556 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OR1E2P47887 323 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 SLC5A12Q1EHB4 618 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 CPZQ66K79 652 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 DEFB119Q8N690 84 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 SMYD1Q8NB12 490 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 C11orf24Q96F05 449 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 ZNF696Q9H7X3 374 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 REEP1Q9H902 201 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OLAHQ9NV23 265 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 DLGAP1O14490 977 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 TFAP2AP05549 437 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 HNRNPA2B1P22626 353 aaKnown RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 CMPK1P30085 196 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 GZMMP51124 257 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 SCARB2Q14108 478 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 CYBRD1Q53TN4 286 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 Q6ZS52 159 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 TRIM73Q86UV7 250 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 ARL10Q8N8L6 244 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OR2A1Q8NGT9 310 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OR8K5Q8NH50 307 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OR52J3Q8NH60 311 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 OTUB1Q96FW1 271 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 MVB12BQ9H7P6 319 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 TEX10Q9NXF1 929 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 PDP1Q9P0J1 537 aaPredicted RBP13.04□□□□□ -0.32
CLK3-203ENST00000454830 ICKQ9UPZ9 632 aa13.04□□□□□ -0.32
CLK3-203ENST00000454830 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 WASHC1A8K0Z3 465 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 M0QX08 132 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 ZW10O43264 779 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 PRKRAO75569 313 aaKnown RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 EML2O95834 649 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 AKT2P31751 481 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 DCTP40126 519 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 ESRRGP62508 458 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 SLC36A3Q495N2 470 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 TPRG1LQ5T0D9 272 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 OR2T5Q6IEZ7 315 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 WASH2PQ6VEQ5 465 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 OR2T29Q8NH02 315 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 RLN3Q8WXF3 142 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 RAB8BQ92930 207 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 RBM4BQ9BQ04 359 aaKnown RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 RBM4Q9BWF3 364 aaKnown RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 SCN3AQ9NY46 2000 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 TESMINQ9Y4I5 508 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 H3BNH8 94 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 KRT75O95678 551 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 SEMA4FO95754 770 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 RAD23AP54725 363 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 NR1H2P55055 460 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 MRPS21P82921 87 aaKnown RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 VLDLRP98155 873 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 REEP5Q00765 189 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 BIRC2Q13490 618 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms