RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 H0YIG0 161 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 MKRN2OSH3BPM6 223 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 PEX12O00623 359 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 PPP6CO00743 305 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 GSTM2P28161 218 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 MAT1AQ00266 395 aaKnown RBP13.87□□□□□ -0.19
VPS16-205ENST00000453689 RGS1Q08116 209 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 HYAL2Q12891 473 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 LETMD1Q6P1Q0 360 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 MED27Q6P2C8 311 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 GPRIN3Q6ZVF9 776 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 LAPTM4BQ86VI4 370 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 PDSS2Q86YH6 399 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS16-205ENST00000453689 ARFGAP2Q8N6H7 521 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TMEM102Q8N9M5 508 aaPredicted RBP13.87□□□□□ -0.19
VPS16-205ENST00000453689 TRPV3Q8NET8 790 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TTLQ8NG68 377 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 OR4F6Q8NGB9 312 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 C9orf43Q8TAL5 461 aaPredicted RBP13.87□□□□□ -0.19
VPS16-205ENST00000453689 RAB3IL1Q8TBN0 382 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 CREB3L4Q8TEY5 395 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 AGAP11Q8TF27 550 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 CDK15Q96Q40 435 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TGIF2Q9GZN2 237 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 ANKHQ9HCJ1 492 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 SEMA3GQ9NS98 782 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 P4HTMQ9NXG6 502 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TRPS1Q9UHF7 1281 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TP53TG5Q9Y2B4 290 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 HS3ST3B1Q9Y662 390 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 SLC22A7Q9Y694 548 aa13.87□□□□□ -0.19
VPS16-205ENST00000453689 TMEM114B3SHH9 223 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 H0YIV9 168 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 SGK494L7N484 410 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 SOCS6O14544 535 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 RDH16O75452 317 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 KLHL18O94889 574 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 ESRRBO95718 433 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 IGHEP01854 428 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 BGNP21810 368 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 GRK2P25098 689 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 CCL11P51671 97 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 RRADP55042 308 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 GALNT1Q10472 559 aaPredicted RBP13.86□□□□□ -0.19
VPS16-205ENST00000453689 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 ZC3H7AQ8IWR0 971 aaKnown RBP13.86□□□□□ -0.19
VPS16-205ENST00000453689 LAS2Q8IYD9 372 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 SHISA5Q8N114 240 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 NACC2Q96BF6 587 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 SEC16BQ96JE7 1060 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 FER1L6-AS2Q96M78 137 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 SLC6A16Q9GZN6 736 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 EML4Q9HC35 981 aaKnown RBP13.86□□□□□ -0.19
VPS16-205ENST00000453689 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
VPS16-205ENST00000453689 C14orf105Q9NVL8 296 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 HCN3Q9P1Z3 774 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 ZNF225Q9UK10 706 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 BOD1L1Q8NFC6 3051 aa13.86□□□□□ -0.19
VPS16-205ENST00000453689 A0A1B0GTL3 188 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 K7EM74 188 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 MASP2O00187 686 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 UBFD1O14562 309 aaKnown RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 CEACAM4O75871 244 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 OR4F21O95013 312 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 BMP10O95393 424 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 B3GALT4O96024 378 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 ENO1P06733 434 aaKnown RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 SERPINA6P08185 405 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 ZNF888P0CJ79 500 aaPredicted RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 ALOX12P18054 663 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 SERPINB1P30740 379 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 C19orf57Q0VDD7 668 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 STX3Q13277 289 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 HERC3Q15034 1050 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 CPSF6Q16630 551 aaKnown RBP eCLIP13.85□□□□□ -0.19
VPS16-205ENST00000453689 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 ARL13AQ5H913 290 aaPredicted RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 TOR1AIP1Q5JTV8 583 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 DCAF10Q5QP82 559 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 ATG16L1Q676U5 607 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 KIRREL2Q6UWL6 708 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 CUZD1Q86UP6 607 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 OR7G3Q8NG95 312 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 UTP15Q8TED0 518 aaKnown RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 REPS1Q96D71 796 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 MESP1Q9BRJ9 268 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 SLC29A3Q9BZD2 475 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 AICDAQ9GZX7 198 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 KLHL31Q9H511 634 aa13.85□□□□□ -0.19
VPS16-205ENST00000453689 ZNF71Q9NQZ8 489 aaPredicted RBP13.85□□□□□ -0.19
VPS16-205ENST00000453689 C3orf18Q9UK00 162 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms