RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 ESPL1Q14674 2120 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 HEATR5BQ9P2D3 2071 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 GMNCA6NCL1 334 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 CYSRT1A8MQ03 144 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 P2RX6O15547 441 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 FOXS1O43638 330 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 STATHP02808 62 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 VIMP08670 466 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 RPS17P08708 135 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 IMPDH1P20839 514 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 CCND1P24385 295 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 MRPL49Q13405 166 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 NAE1Q13564 534 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 RCN2Q14257 317 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 CFAP157Q5JU67 520 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 ATG9BQ674R7 924 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 FAAH2Q6GMR7 532 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 SULT1C3Q6IMI6 304 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 METTL2BQ6P1Q9 378 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 MBOAT1Q6ZNC8 495 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 C17orf64Q86WR6 236 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 PRR7Q8TB68 274 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 PPP4R1Q8TF05 950 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 CNDP1Q96KN2 507 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 EGFL8Q99944 293 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 MESP1Q9BRJ9 268 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 TRMOQ9BU70 441 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 THAP1Q9NVV9 213 aa17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 TNPO3Q9Y5L0 923 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-204ENST00000453046 USP9XQ93008 2570 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 SHANK1Q9Y566 2161 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 EDF1O60869 148 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 GP1BBP13224 206 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 GRK3P35626 688 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 HNMTP50135 292 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 NAGLUP54802 743 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 ABCE1P61221 599 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 OCRLQ01968 901 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 EEF1A2Q05639 463 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 FAM53BQ14153 422 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 NR6A1Q15406 480 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 SYT16Q17RD7 645 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 ZNF678Q5SXM1 525 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 ISLR2Q6UXK2 745 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 LINC00696Q6ZRV3 163 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 FRMD7Q6ZUT3 714 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 NDUFAF7Q7L592 441 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 KBTBD2Q8IY47 623 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 AMER3Q8N944 861 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 RHBDF1Q96CC6 855 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 PHF21BQ96EK2 531 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 TGIF2Q9GZN2 237 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 ARL15Q9NXU5 204 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 WWOXQ9NZC7 414 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 MKL2Q9ULH7 1088 aa17.04■□□□□ 0.32
SQSTM1-204ENST00000453046 NUP210LQ5VU65 1888 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 MDC1Q14676 2089 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 NCF1BA6NI72 391 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 NCF1CA8MVU1 366 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 NCF1P14598 390 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 SLC1A6P48664 564 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 MAT1AQ00266 395 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 Q0VFX4 171 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 ELOAQ14241 798 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 CES4AQ5XG92 561 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 CAPN13Q6MZZ7 669 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 IGFL2Q6UWQ7 119 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 FAM47EQ6ZV65 393 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 KIRREL3Q8IZU9 778 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 CCNYL1Q8N7R7 359 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 CAMKVQ8NCB2 501 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 ATL1Q8WXF7 558 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 FBXL8Q96CD0 374 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 SLCO1B3Q9NPD5 702 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 AGPAT4Q9NRZ5 378 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 FGFR1OP2Q9NVK5 253 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 PTBP2Q9UKA9 531 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 PCDHGA10Q9Y5H3 936 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
SQSTM1-204ENST00000453046 KCNE1BA0A087WTH5 132 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 FEZF1A0PJY2 475 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 H0YIG0 161 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 PCDH17O14917 1159 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 GUCA1CO95843 209 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 COX6A1P12074 109 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 CDH1P12830 882 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 DRD4P21917 467 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 EEF1DP29692 281 aaKnown RBP17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 SEC24CP53992 1094 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 CSNK1G2P78368 415 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 CDC16Q13042 620 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
SQSTM1-204ENST00000453046 LCTLQ6UWM7 567 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms