RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OR2L5Q8NG80 312 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 CT55Q8WUE5 264 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 MMABQ96EY8 250 aaPredicted RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 CMTM7Q96FZ5 175 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SMIM10Q96HG1 83 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 TMEM120AQ9BXJ8 343 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 REXO4Q9GZR2 422 aaKnown RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ANKHQ9HCJ1 492 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 PADI1Q9ULC6 663 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ARL2BPQ9Y2Y0 163 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 NAALAD2Q9Y3Q0 740 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 FER1L5A0AVI2 2057 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 NCOR2Q9Y618 2525 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 URADA6NGE7 173 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 RTCAO00442 366 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 GALR3O60755 368 aaPredicted RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DIAPH2O60879 1101 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DNAJB6O75190 326 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 ULK1O75385 1050 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 RDH16O75452 317 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 NSA2O95478 260 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 CCNYL3P0C7X3 344 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 AGXTP21549 392 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 FBLP22087 321 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 PTX3P26022 381 aaPredicted RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 STAT5AP42229 794 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 CLN3Q13286 438 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SYT16Q17RD7 645 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 TMEM35AQ53FP2 167 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DEPDC1Q5TB30 811 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 PRMT9Q6P2P2 845 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 TRIM40Q6P9F5 258 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 EPGNQ6UW88 154 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 CHSY3Q70JA7 882 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 COX15Q7KZN9 410 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DDIASQ8IXT1 998 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 AMER3Q8N944 861 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 C10orf82Q8WW14 230 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 KCNE4Q8WWG9 221 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 C19orf60Q96EN9 201 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 MVB12AQ96EY5 273 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 THOC1Q96FV9 657 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 QRFPRQ96P65 431 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SERPINI1Q99574 410 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 C17orf62Q9BQA9 187 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DPH2Q9BQC3 489 aaPredicted RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SORBS1Q9BX66 1292 aaKnown RBP12.35□□□□□ -0.43
VPS33A-202ENST00000451053 NUF2Q9BZD4 464 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 ACPTQ9BZG2 426 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 MEAF6Q9HAF1 191 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF304Q9HCX3 659 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 RIC8BQ9NVN3 520 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 PPT2Q9UMR5 302 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 CDC14AQ9UNH5 594 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SLC12A4Q9UP95 1085 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 DNAJC15Q9Y5T4 150 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 PTGDR2Q9Y5Y4 395 aa12.35□□□□□ -0.43
VPS33A-202ENST00000451053 SLC28A1O00337 649 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 PLPP1O14494 284 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF195O14628 629 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 PIP5K1BO14986 540 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CNOT3O75175 753 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ONECUT2O95948 504 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 HSD3B1P14060 373 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 HSD3B2P26439 372 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CERS1P27544 350 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 AVPR1BP47901 424 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 OLR1P78380 273 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 BTN3A2P78410 334 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 BTKQ06187 659 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 SRSF6Q13247 344 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CUL3Q13618 768 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 DSG2Q14126 1118 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 UGT3A2Q3SY77 523 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ARHGAP40Q5TG30 622 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 VASH2Q86V25 355 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 TMEM151BQ8IW70 566 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 IL22RA1Q8N6P7 574 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 OR5T3Q8NGG3 340 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 RGMAQ96B86 450 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 RILPQ96NA2 401 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 KCNC2Q96PR1 638 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CCDC28BQ9BUN5 200 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 MRPL1Q9BYD6 325 aaKnown RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms