RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 VWA5B1Q5TIE3 1220 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 JMJD6Q6NYC1 403 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 PRMT9Q6P2P2 845 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 GOLGA7Q7Z5G4 137 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 C17orf64Q86WR6 236 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 PARP9Q8IXQ6 854 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 LRRC34Q8IZ02 419 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF483Q8TF39 744 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 MIEF2Q96C03 454 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 MMABQ96EY8 250 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 MAGEB10Q96LZ2 347 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 CRB3Q9BUF7 120 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF552Q9H707 407 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF282Q9UDV7 671 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 PCTPQ9UKL6 214 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 SCN3AQ9NY46 2000 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 A0A0A6YYC8 382 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 I3L1I5 382 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 OTCP00480 354 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 ZGLP1P0C6A0 271 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 EZRP15311 586 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 ITGA3P26006 1051 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 CD97P48960 835 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 CCNG1P51959 295 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 RCN2Q14257 317 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 SLC6A19Q695T7 634 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 KIRREL2Q6UWL6 708 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 LAPTM4BQ86VI4 370 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 KIRREL3Q8IZU9 778 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 Q8NA96 180 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 CPT1CQ8TCG5 803 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 MACROD1Q9BQ69 325 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 DRC3Q9H069 523 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 IPPKQ9H8X2 491 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 ZBTB20Q9HC78 741 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 SEMA4BQ9NPR2 832 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 SLAMF7Q9NQ25 335 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 TMEM184CQ9NVA4 438 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 MAP10Q9P2G4 905 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 TRPC4Q9UBN4 977 aa16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 NXT1Q9UKK6 140 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 MRPS2Q9Y399 296 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-204ENST00000450303 ASH1LQ9NR48 2969 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 FEZF1A0PJY2 475 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 LRRC14BA6NHZ5 514 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 TCP11X1B4DZS4 312 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 KLF11O14901 512 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 FOXS1O43638 330 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 SORBS2O94875 1100 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 HSPA4LO95757 839 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 NPPBP16860 134 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 PKNOX1P55347 436 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 ABCE1P61221 599 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 GALNT1Q10472 559 aaPredicted RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 LCP2Q13094 533 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 IFT88Q13099 833 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 AIMP2Q13155 320 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 SYT16Q17RD7 645 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 ZXDCQ2QGD7 858 aaPredicted RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 PLEKHN1Q494U1 663 aaPredicted RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 ZCCHC23Q6ZST2 131 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 FRMD7Q6ZUT3 714 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 ATCAYQ86WG3 371 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 TRPC4APQ8TEL6 797 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 SLC5A11Q8WWX8 675 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 ZNF75CPQ92670 426 aaPredicted RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 C8orf44Q96CB5 159 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 GSTO2Q9H4Y5 243 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 NOL11Q9H8H0 719 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 SEMA3GQ9NS98 782 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 C5AR2Q9P296 337 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 C3orf18Q9UK00 162 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 CDC14AQ9UNH5 594 aa16.14■□□□□ 0.17
PRPF40A-204ENST00000450303 UGDHO60701 494 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 CXCR2P25025 360 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 UQCRFS1P47985 274 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 SLC1A6P48664 564 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 EMP3P54852 163 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 CDH13P55290 713 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 CSNK1G2P78368 415 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 IRF8Q02556 426 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 LAPTM5Q13571 262 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 INPP5JQ15735 1006 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 HIST2H2ACQ16777 129 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 HIST2H2AA3Q6FI13 130 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 FAAH2Q6GMR7 532 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 MILR1Q7Z6M3 343 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 PIGWQ7Z7B1 504 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 ARHGEF39Q8N4T4 335 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 TBC1D19Q8N5T2 526 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 AMER3Q8N944 861 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 OR11G2Q8NGC1 345 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 OR6Y1Q8NGX8 325 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 OR4K3Q96R72 315 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 NTMT1Q9BV86 223 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 ACTR8Q9H981 624 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 PELI2Q9HAT8 420 aa16.13■□□□□ 0.17
PRPF40A-204ENST00000450303 THAP1Q9NVV9 213 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms