RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 COA7Q96BR5 231 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 YIPF6Q96EC8 236 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MALSU1Q96EH3 234 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZC3HAV1LQ96H79 300 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 FAM84BQ96KN1 310 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 WDFY2Q96P53 400 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR52E6Q96RD3 313 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SEC22CQ9BRL7 303 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TTPALQ9BTX7 342 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 EDEM2Q9BV94 578 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RUSC1Q9BVN2 902 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 FNDC11Q9BVV2 318 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GATA5Q9BWX5 397 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 FAM126AQ9BYI3 521 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 PCDHAC1Q9H158 963 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 METTL9Q9H1A3 318 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SYT4Q9H2B2 425 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TFB2MQ9H5Q4 396 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 MINDY3Q9H8M7 445 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GORASP2Q9H8Y8 452 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RPS10P5Q9NQ39 176 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 INPP5EQ9NRR6 644 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ERVK13-1Q9NX77 482 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GAR1Q9NY12 217 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 KANSL3Q9P2N6 904 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NLKQ9UBE8 527 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OPTCQ9UBM4 332 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RPS6KB2Q9UBS0 482 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TSR3Q9UJK0 312 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC25A13Q9UJS0 675 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SCML1Q9UN30 329 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RPH3AQ9Y2J0 694 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 SPIN1Q9Y657 262 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 C5P01031 1676 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 BTBD17A6NE02 478 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GGT3PA6NGU5 568 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF705EA8MWA4 302 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 SPATA31C2B4DYI2 1134 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 F5H0A9 414 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 M0R143 59 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CTDSP2O14595 271 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TNFRSF10BO14763 440 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 WNT9AO14904 365 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC16A6O15403 523 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CDC123O75794 336 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 BEST1O76090 585 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OLFM2O95897 454 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 THBS1P07996 1170 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF35P13682 527 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TPH1P17752 444 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RAB5AP20339 215 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DGKAP23743 735 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IVDP26440 423 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 HTR1BP28222 390 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 HTR2CP28335 458 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GGT2P36268 569 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MC3RP41968 323 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCP4P48539 62 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GLUD2P49448 558 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GPR15P49685 360 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SCNN1GP51170 649 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SNRPD2P62316 118 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 VAMP2P63027 116 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ADARB1P78563 741 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 H3F3AP84243 136 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 EMX2Q04743 252 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SP140Q13342 867 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 BAATQ14032 418 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 MAPK14Q16539 360 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SMTNL2Q2TAL5 461 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GTDC1Q4AE62 458 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CYP27C1Q4G0S4 372 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SPIN4Q56A73 249 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SGO1Q5FBB7 561 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF311Q5JNZ3 666 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TCTE1Q5JU00 501 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 H3F3CQ6NXT2 135 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC39A4Q6P5W5 647 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TMEM81Q6P7N7 255 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZC3H14Q6PJT7 736 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 NDUFAF7Q7L592 441 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RD3Q7Z3Z2 195 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF467Q7Z7K2 595 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GALNT10Q86SR1 603 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MCATQ8IVS2 390 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ENTHD1Q8IYW4 607 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 BEST3Q8N1M1 668 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RASGEF1AQ8N9B8 481 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF565Q8N9K5 539 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCSK9Q8NBP7 692 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 TMEM161BQ8NDZ6 487 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IPMKQ8NFU5 416 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR2D3Q8NGH3 330 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR6B3Q8NGW1 331 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR2T35Q8NGX2 323 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR52N1Q8NH53 320 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CD300LFQ8TDQ1 290 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF384Q8TF68 577 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MYLIPQ8WY64 445 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DNAJC19Q96DA6 116 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms