RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RC3H2Q9HBD1 1191 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 SLAMF7Q9NQ25 335 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 SPATA6Q9NWH7 488 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 SLCO1C1Q9NYB5 712 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CNOT2Q9NZN8 540 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 TRPM5Q9NZQ8 1165 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HCN3Q9P1Z3 774 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 MALT1Q9UDY8 824 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 DPP7Q9UHL4 492 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 TINAGQ9UJW2 476 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 DUSP12Q9UNI6 340 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 RNF215Q9Y6U7 377 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 M0R129 80 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 GTPBP1O00178 669 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 RHOBTB1O94844 696 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 ESR1P03372 595 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HRGP04196 525 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 ADRA1AP35348 466 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 AGFG1P52594 562 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 PSMA6P60900 246 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 PTGR1Q14914 329 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 GPR33Q49SQ1 333 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 DACT2Q5SW24 774 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 EEF1DP3Q658K8 133 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 PLAG1Q6DJT9 500 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 XRRA1Q6P2D8 792 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CNIH2Q6PI25 160 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HTR3DQ70Z44 454 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 VTCN1Q7Z7D3 282 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 KIAA0907Q7Z7F0 614 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 ADGRF3Q8IZF5 1079 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 TMEM132CQ8N3T6 1108 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 DNAJC5GQ8N7S2 189 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 RNF149Q8NC42 400 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 STAG3L4Q8TBR4 150 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CHTF18Q8WVB6 975 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 AP3S1Q92572 193 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 FCRL5Q96RD9 977 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CPPED1Q9BRF8 314 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 SORBS1Q9BX66 1292 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 SLC29A3Q9BZD2 475 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CDCP1Q9H5V8 836 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 SLC6A13Q9NSD5 602 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 PIGVQ9NUD9 493 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 NDUFB11Q9NX14 153 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 REV1Q9UBZ9 1251 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 PCTPQ9UKL6 214 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 TRBV5-3A0A0A0MS03 114 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GLYATL1P3A0A0U1RQE8 302 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NCF1BA6NI72 391 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 NCF1CA8MVU1 366 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 SGK494L7N484 410 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 LGALS8O00214 317 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 B4GALT5O43286 388 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 LILRA1O75019 489 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 EPOP01588 193 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SEMG1P04279 462 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SDC2P34741 201 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NNMTP40261 264 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ALDH9A1P49189 494 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 AGTR2P50052 363 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GEMP55040 296 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PPP3R1P63098 170 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 IL18Q14116 193 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 P2RY14Q15391 338 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 AP5B1Q2VPB7 878 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 RFTN2Q52LD8 501 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 NHLRC3Q5JS37 347 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CDKL4Q5MAI5 379 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SPANXN4Q5MJ08 99 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 DCAF15Q66K64 600 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ZNF57Q68EA5 555 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 IL27RAQ6UWB1 636 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 MOB2Q70IA6 237 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 STPG2Q8N412 459 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 LIX1Q8N485 282 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 OR56A4Q8NGH8 313 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 OR6P1Q8NGX9 317 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NDRG1Q92597 394 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 KIAA1191Q96A73 305 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 UROC1Q96N76 676 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 EPYCQ99645 322 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PIP5K1AQ99755 562 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ZNF436Q9C0F3 470 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 ARHGAP39Q9C0H5 1083 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CDT1Q9H211 546 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ESRP2Q9H6T0 727 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 GALPQ9UBC7 116 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 MGAT4BQ9UQ53 548 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 TMEM5Q9Y2B1 443 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms