RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 DOCK7Q96N67 2140 aa6.8□□□□□ -1.32
RBM39-218ENST00000449489 KCNE1BA0A087WTH5 132 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 IGKV1-8A0A0C4DH67 115 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 A0A1W2PPR1 153 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 KIF5CO60282 957 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 C1orf105O95561 183 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 APOA4P06727 396 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 PRSS56P0CW18 603 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 SKILP12757 684 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 PAX1P15863 534 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 AOAHP28039 575 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 CEACAM8P31997 349 aaPredicted RBP6.79□□□□□ -1.32
RBM39-218ENST00000449489 TIMP3P35625 211 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 CYLC1P35663 651 aaPredicted RBP6.79□□□□□ -1.32
RBM39-218ENST00000449489 NR0B1P51843 470 aaKnown RBP6.79□□□□□ -1.32
RBM39-218ENST00000449489 OR4D2P58180 307 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 ARHGAP19Q14CB8 494 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 WLSQ5T9L3 541 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 MFSD4BQ5TF39 518 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 ALKBH5Q6P6C2 394 aaKnown RBP6.79□□□□□ -1.32
RBM39-218ENST00000449489 POMZP3Q6PJE2 187 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 MDGA2Q7Z553 956 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 HIPK1Q86Z02 1210 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 RFX6Q8HWS3 928 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 FAM109AQ8N4B1 249 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 FAM169BQ8N8A8 192 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 OR9A4Q8NGU2 314 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 SMPDL3AQ92484 453 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 LRRC45Q96CN5 670 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 QKIQ96PU8 341 aaKnown RBP eCLIP6.79□□□□□ -1.326e-33■■■□□ 18.8
RBM39-218ENST00000449489 YIPF4Q9BSR8 244 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 FAM129AQ9BZQ8 928 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 MRPS30Q9NP92 439 aaKnown RBP6.79□□□□□ -1.32
RBM39-218ENST00000449489 LANCL2Q9NS86 450 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 CHMP5Q9NZZ3 219 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 ACAD8Q9UKU7 415 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 DUSP10Q9Y6W6 482 aa6.79□□□□□ -1.32
RBM39-218ENST00000449489 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 HEATR5AQ86XA9 2040 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 TRIM64A6NGJ6 449 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 MROH6A6NGR9 719 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 TRIM64BA6NI03 449 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 SAGE2PA6NJ88 616 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CCL22O00626 93 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 P2RX6O15547 441 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 TMCC2O75069 709 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 DNAJB6O75190 326 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CCNDBP1O95273 360 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CNOT4O95628 575 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 H2AFZP0C0S5 128 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 NAT2P11245 290 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 FPR1P21462 350 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 MSNP26038 577 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 FOXN2P32314 431 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 HSD17B2P37059 387 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CDKN2BP42772 138 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 DYNLT1P63172 113 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 ABATP80404 500 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 MYL5Q02045 173 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 KRTAP1-1Q07627 177 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 PRPSAP1Q14558 356 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 KIAA0930Q6ICG6 404 aaPredicted RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 SEM1Q6ZVN7 128 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 H2AFVQ71UI9 128 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 FBXW8Q8N3Y1 598 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 KIF2BQ8N4N8 673 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 TMEM156Q8N614 296 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 PSD4Q8NDX1 1056 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 NFAM1Q8NET5 270 aaPredicted RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 OR2M7Q8NG81 312 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CFAP61Q8NHU2 1237 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 P3H4Q92791 437 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 SLCO2A1Q92959 643 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 NTNG2Q96CW9 530 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 EBNA1BP2Q99848 306 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 TBL1YQ9BQ87 522 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 DEFB126Q9BYW3 111 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 TTTY12Q9BZ98 90 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 ATG10Q9H0Y0 220 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 IL1RL2Q9HB29 575 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 DEPPQ9NTK1 212 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 DDX56Q9NY93 547 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 JKAMPQ9P055 326 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 CTTNBP2NLQ9P2B4 639 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 CIDEBQ9UHD4 219 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 PPIEQ9UNP9 301 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 YARS2Q9Y2Z4 477 aaKnown RBP6.78□□□□□ -1.32
RBM39-218ENST00000449489 MED12Q93074 2177 aa6.78□□□□□ -1.32
RBM39-218ENST00000449489 NINQ8N4C6 2090 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 A0A087X0T9 212 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FAM95CA0A1B0GW59 222 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 MBD3L4A6NDZ8 208 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 OR2W5A6NFC9 320 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 MBD3L5A6NJ08 208 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 AHRRA9YTQ3 701 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 KPNA5O15131 536 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms