RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MIEF1Q9NQG6 463 aa16.89■□□□□ 0.29
LMNA-208ENST00000448611 SCOCQ9UIL1 159 aa16.89■□□□□ 0.29
LMNA-208ENST00000448611 ISM1B1AKI9 464 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 UPK1AO00322 258 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 DLGAP1O14490 977 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 TMPRSS11DO60235 418 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 RASAL1O95294 804 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 TNFP01375 233 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 MVDP53602 400 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 C16orf72Q14CZ0 275 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 ADPRMQ3LIE5 342 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 FAM47BQ8NA70 645 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 GPBAR1Q8TDU6 330 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 TEFMQ96QE5 360 aaKnown RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 ORAI3Q9BRQ5 295 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 SPATA9Q9BWV2 254 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 YY1AP1Q9H869 796 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 C8orf4Q9NR00 106 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 PCDHGB4Q9UN71 923 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 AP1M2Q9Y6Q5 423 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 NUP214P35658 2090 aaPredicted RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 PPM1DO15297 605 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 DEAF1O75398 565 aaPredicted RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 SERPIND1P05546 499 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 AHRP35869 848 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 GSTM5P46439 218 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 EIF2B5Q13144 721 aaKnown RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 TMEM35AQ53FP2 167 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 NHSL2Q5HYW2 709 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 OR4C11Q6IEV9 310 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 IYDQ6PHW0 289 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
LMNA-208ENST00000448611 CHERPQ8IWX8 916 aaKnown RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 EID3Q8N140 333 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 AMER3Q8N944 861 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 TCEAL2Q9H3H9 227 aaPredicted RBP16.88■□□□□ 0.29
LMNA-208ENST00000448611 SRMSQ9H3Y6 488 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 SYNPO2LQ9H987 977 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 GPATCH2Q9NW75 528 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 TAS2R9Q9NYW1 312 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 UTS2RQ9UKP6 389 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 SNX7Q9UNH6 387 aa16.88■□□□□ 0.29
LMNA-208ENST00000448611 A0A0A6YYD5 115 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 SPTY2D1-AS1A0A0U1RR47 76 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 RNF103-CHMP3A0A140T963 221 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 A0A1W2PPC4 97 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 A0A1W2PRB8 838 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 A6NHS1 94 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 SMNDC1O75940 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
LMNA-208ENST00000448611 NTRK1P04629 796 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 NUDT7P0C024 238 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 CHN2P52757 468 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 PLA2G16P53816 162 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 VEZF1Q14119 521 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 GK3PQ14409 553 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 HEPACAMQ14CZ8 416 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 PRRT3Q5FWE3 981 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
LMNA-208ENST00000448611 FLVCR1-AS1Q8TAF5 88 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 PYURFQ96I23 114 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 VPS50Q96JG6 964 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 CNBD2Q96M20 576 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 SLC35A5Q9BS91 424 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 ABCG4Q9H172 646 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 KLHL31Q9H511 634 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 KLHL20Q9Y2M5 609 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 PCDHGB5Q9Y5G0 923 aa16.87■□□□□ 0.29
LMNA-208ENST00000448611 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 THEGLP0DJG4 465 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 HOXB6P17509 224 aaKnown RBP16.86■□□□□ 0.29
LMNA-208ENST00000448611 KDELR2P33947 212 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 NUDT1P36639 197 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TRA2BP62995 288 aaKnown RBP16.86■□□□□ 0.29
LMNA-208ENST00000448611 FZD2Q14332 565 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 ZNF793Q6ZN11 406 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 PAQR7Q86WK9 346 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 NAGSQ8N159 534 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TBC1D19Q8N5T2 526 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TRIML2Q8N7C3 387 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 MS4A6EQ96DS6 147 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 ZNF764Q96H86 408 aaPredicted RBP16.86■□□□□ 0.29
LMNA-208ENST00000448611 MACROD1Q9BQ69 325 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 C17orf62Q9BQA9 187 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TPSD1Q9BZJ3 242 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TEX10Q9NXF1 929 aaPredicted RBP16.86■□□□□ 0.29
LMNA-208ENST00000448611 SAMD4AQ9UPU9 718 aaKnown RBP16.86■□□□□ 0.29
LMNA-208ENST00000448611 PCDHGA4Q9Y5G9 962 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 SLCO1B1Q9Y6L6 691 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TRIOO75962 3097 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 MUC3AQ02505 3323 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 IGHV1OR15-9A0A0B4J2B8 117 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 KRBA1A5PL33 1030 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 C4orf51C9J302 202 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 EI24O14681 340 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 ZNF217O75362 1048 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 STATHP02808 62 aa16.86■□□□□ 0.29
LMNA-208ENST00000448611 TXNL4AP83876 142 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms