RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 EPHB3P54753 998 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 DCDC1P59894 354 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 CAP1Q01518 475 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 IFITM2Q01629 132 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF763Q0D2J5 394 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 AGAP6Q5VW22 663 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 SLC7A5P1Q8MH63 180 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 FLCNQ8NFG4 579 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 GPR156Q8NFN8 814 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 AGAP4Q96P64 663 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 TRNT1Q96Q11 434 aaKnown RBP18.29■□□□□ 0.52
SDCBP-204ENST00000447182 FAM129BQ96TA1 746 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 MIR1-1HGQ9H1L0 117 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 FTSJ1Q9UET6 329 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 QSOX1O00391 747 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PCDH17O14917 1159 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 BNIP3LO60238 219 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF30P17039 623 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 MAGP20916 626 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 BMPR1AP36894 532 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PRIM2P49643 509 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF630Q2M218 657 aaPredicted RBP18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PLAG1Q6DJT9 500 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 TRIM40Q6P9F5 258 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 DPY19L3Q6ZPD9 716 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 SLC44A2Q8IWA5 706 aaPredicted RBP18.29■□□□□ 0.52
SDCBP-204ENST00000447182 HS6ST3Q8IZP7 471 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 NLGN4XQ8N0W4 816 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 OR4K1Q8NGD4 311 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 C3orf14Q9HBI5 128 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 CRNNQ9UBG3 495 aaPredicted RBP18.29■□□□□ 0.52
SDCBP-204ENST00000447182 SLC6A14Q9UN76 642 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PCM1Q15154 2024 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TMEM202A6NGA9 273 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 FAM47E-STBD1D6RA91 191 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 J3KTA2 159 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 PSMD11O00231 422 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 SH3BGRLO75368 114 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CCNB2O95067 398 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 C6orf47O95873 294 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CATP04040 527 aaKnown RBP18.28■□□□□ 0.52
SDCBP-204ENST00000447182 SOD2P04179 222 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 ADRA2AP08913 450 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 IMPA1P29218 277 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TIE1P35590 1138 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 PCBP3P57721 371 aaKnown RBP18.28■□□□□ 0.52
SDCBP-204ENST00000447182 RPS13P62277 151 aaKnown RBP18.28■□□□□ 0.52
SDCBP-204ENST00000447182 POLR2LP62875 67 aaKnown RBP18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CDK6Q00534 326 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 PDE7AQ13946 482 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 DMC1Q14565 340 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 MED22Q15528 200 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TSTQ16762 297 aaKnown RBP18.28■□□□□ 0.52
SDCBP-204ENST00000447182 REPS1Q96D71 796 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 SLC30A2Q9BRI3 323 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 FAM83DQ9H4H8 585 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CLN6Q9NWW5 311 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TAS2R16Q9NYV7 291 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 ENPP4Q9Y6X5 453 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 M0R129 80 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 ARHGAP33O14559 1287 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 NPC1O15118 1278 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 GADD45GO95257 159 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 RHCEP18577 417 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TM4SF4P48230 202 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 RAB33AQ14088 237 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CCSMST1Q4G0I0 132 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 LRRC73Q5JTD7 316 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 MED27Q6P2C8 311 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 SLCO4C1Q6ZQN7 724 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TCEAL8Q8IYN2 117 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 SCAMP4Q969E2 229 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 NEK6Q9HC98 313 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 CFAP97Q9P2B7 532 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 INSL5Q9Y5Q6 135 aa18.28■□□□□ 0.52
SDCBP-204ENST00000447182 PLXNA2O75051 1894 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 GPR37L1O60883 481 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 SLC16A8O95907 504 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 FURINP09958 794 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 CD72P21854 359 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 RPL3P39023 403 aaKnown RBP18.27■□□□□ 0.52
SDCBP-204ENST00000447182 MAPK9P45984 424 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 CRISP1P54107 249 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 CASP9P55211 416 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 SSX1Q16384 188 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 FRMPD2BQ6IN97 320 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 KLHL17Q6TDP4 642 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 MMAAQ8IVH4 418 aaKnown RBP18.27■□□□□ 0.52
SDCBP-204ENST00000447182 CELF2-AS1Q8N7Q2 184 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 GALNT6Q8NCL4 622 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 SETD6Q8TBK2 473 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 GTPBP3Q969Y2 492 aaKnown RBP18.27■□□□□ 0.52
SDCBP-204ENST00000447182 YIPF2Q9BWQ6 316 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 RNF186Q9NXI6 227 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 KCNE2Q9Y6J6 123 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 COL4A6Q14031 1691 aa18.27■□□□□ 0.52
SDCBP-204ENST00000447182 HTTP42858 3142 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 PRAMEF33A0A0G2JMD5 474 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 OR2AG2A6NM03 316 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms