RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 GRHL2Q6ISB3 625 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 NAT8LQ8N9F0 302 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 KCTD7Q96MP8 289 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 NKX2-4Q9H2Z4 354 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 R3HDM2Q9Y2K5 976 aaKnown RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 FAM227AF5H4B4 570 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ORC5O43913 435 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 PIAS1O75925 651 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 F8A1P23610 371 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 DNAJB13P59910 316 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 TRAM2Q15035 370 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 C1orf52Q8N6N3 182 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 TBC1D17Q9HA65 648 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 COMMD3-BMI1R4GMX3 469 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 J3KR12 359 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ARL6IP5O75915 188 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 BPNT1O95861 308 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ACVRL1P37023 503 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ZNF460Q14592 562 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CHERPQ8IWX8 916 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 ARL14Q8N4G2 192 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SNRNP27Q8WVK2 155 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 TCEAL3Q969E4 200 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 OR8D2Q9GZM6 311 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CCDC59Q9P031 241 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 KCNK6Q9Y257 313 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 PLEKHA6Q9Y2H5 1048 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 SCAMP1O15126 338 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 HNRNPA2B1P22626 353 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 PBX1P40424 430 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CXCL12P48061 93 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 HERV-K104P61576 105 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 RPS13P62277 151 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 TYSND1Q2T9J0 566 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LYSMD4Q5XG99 296 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ZER1Q7Z7L7 766 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 GFM1Q96RP9 751 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 GPR22Q99680 433 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LAMB2P55268 1798 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 A0A075B6Q4 140 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 hCG_2039718K7EN88 272 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 PEPDP12955 493 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 MEF2AQ02078 507 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 KBTBD2Q8IY47 623 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CSNK1A1LQ8N752 337 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 HBEGFQ99075 208 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 NPY6RQ99463 290 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 MED11Q9P086 117 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 AASSQ9UDR5 926 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SOX1O00570 391 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 HCRTR2O43614 444 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 AIREO43918 545 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ICAM2P13598 275 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 EEFSECP57772 596 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 HHEXQ03014 270 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LMAN2Q12907 356 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 MLC1Q15049 377 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 LRRC25Q8N386 305 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 HCN4Q9Y3Q4 1203 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 A0A1W2PQU0 124 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ISPDA4D126 451 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 MPC1LP0DKB6 136 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CD9P21926 228 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 SLC18A1P54219 525 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 KCTD18Q6PI47 426 aaPredicted RBP11.31□□□□□ -0.6
FN1-212ENST00000446046 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 CIB1Q99828 191 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 REEP4Q9H6H4 257 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 GPRC5BQ9NZH0 403 aa11.31□□□□□ -0.6
FN1-212ENST00000446046 PRSS51A0A1B0GVH4 220 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 HTR1AP08908 422 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 CDK6Q00534 326 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 TUBA3CQ13748 450 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
FN1-212ENST00000446046 SPIN3Q5JUX0 258 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 LINGO2Q7L985 606 aa11.3□□□□□ -0.6
FN1-212ENST00000446046 KCNN1Q92952 543 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms