RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CHST10O43529 356 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ZWINTO95229 277 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ESRRBO95718 433 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 PDYNP01213 254 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ZGLP1P0C6A0 271 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 SERPINB1P30740 379 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 HTR6P50406 440 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 PKNOX1P55347 436 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 WDR4P57081 412 aaKnown RBP15.16■□□□□ 0.02
USP39-205ENST00000442708 KLC1Q07866 573 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 RUNX2Q13950 521 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 KHDRBS2Q5VWX1 349 aaKnown RBP15.16■□□□□ 0.02
USP39-205ENST00000442708 TTC19Q6DKK2 380 aaPredicted RBP15.16■□□□□ 0.02
USP39-205ENST00000442708 ZNF793Q6ZN11 406 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ANKRD42Q8N9B4 389 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 OR2Y1Q8NGV0 311 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 OR51Q1Q8NH59 317 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ADAMTS17Q8TE56 1095 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 SNRNP27Q8WVK2 155 aaKnown RBP15.16■□□□□ 0.02
USP39-205ENST00000442708 REPS1Q96D71 796 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 CMTM7Q96FZ5 175 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 HBEGFQ99075 208 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 YIPF2Q9BWQ6 316 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 SORBS1Q9BX66 1292 aaKnown RBP15.16■□□□□ 0.02
USP39-205ENST00000442708 WDR54Q9H977 334 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 ADGRE2Q9UHX3 823 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 MAP4K5Q9Y4K4 846 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 TIMM22Q9Y584 194 aa15.16■□□□□ 0.02
USP39-205ENST00000442708 OR2W5A6NFC9 320 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 PLPP1O14494 284 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 CHRNGP07510 517 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 CDC20Q12834 499 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 CNDP1Q96KN2 507 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 ATP6V1G3Q96LB4 118 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 ZNF717Q9BY31 904 aaPredicted RBP15.15■□□□□ 0.02
USP39-205ENST00000442708 RBCK1Q9BYM8 510 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 SLC29A3Q9BZD2 475 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 FAM117AQ9C073 453 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 TGIF2Q9GZN2 237 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 MKKSQ9NPJ1 570 aaPredicted RBP15.15■□□□□ 0.02
USP39-205ENST00000442708 STK38LQ9Y2H1 464 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 ATRXP46100 2492 aa15.15■□□□□ 0.02
USP39-205ENST00000442708 FAM208BQ5VWN6 2430 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 CDC14CA4D256 554 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 FAM227AF5H4B4 570 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 NPHS1O60500 1241 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 BMP10O95393 424 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 ENO1P06733 434 aaKnown RBP15.14■□□□□ 0.01
USP39-205ENST00000442708 CHN1P15882 459 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 PTX3P26022 381 aaPredicted RBP15.14■□□□□ 0.01
USP39-205ENST00000442708 CERS1P27544 350 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 FOLR3P41439 243 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 XCR1P46094 333 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 NAA20P61599 178 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 OCA2Q04671 838 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 IFT88Q13099 833 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 RCN2Q14257 317 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 UGT8Q16880 541 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 TMEM35AQ53FP2 167 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 ARL13AQ5H913 290 aaPredicted RBP15.14■□□□□ 0.01
USP39-205ENST00000442708 TRIM40Q6P9F5 258 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 SCIMPQ6UWF3 145 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 CHSY3Q70JA7 882 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 NUDCD3Q8IVD9 361 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 CA13Q8N1Q1 262 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 METTL6Q8TCB7 284 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 MIEF2Q96C03 454 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 PEX11GQ96HA9 241 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 MAGEB10Q96LZ2 347 aaPredicted RBP15.14■□□□□ 0.01
USP39-205ENST00000442708 ELOVL6Q9H5J4 265 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 ZNF395Q9H8N7 513 aaPredicted RBP15.14■□□□□ 0.01
USP39-205ENST00000442708 PRM3Q9NNZ6 103 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 PSD3Q9NYI0 1048 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 PPT2Q9UMR5 302 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 SNX6Q9UNH7 406 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 PADI2Q9Y2J8 665 aa15.14■□□□□ 0.01
USP39-205ENST00000442708 BIRC5O15392 142 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 ITM2AO43736 263 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 EEDO75530 441 aaKnown RBP15.13■□□□□ 0.01
USP39-205ENST00000442708 RECKO95980 971 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 ATP5A1P25705 553 aaKnown RBP15.13■□□□□ 0.01
USP39-205ENST00000442708 SERPINB3P29508 390 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 ASPHQ12797 758 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 CUL3Q13618 768 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 ABRAXAS2Q15018 415 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 CHI3L2Q15782 390 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 CRTC2Q53ET0 693 aaPredicted RBP15.13■□□□□ 0.01
USP39-205ENST00000442708 CLEC6AQ6EIG7 209 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 OR4C11Q6IEV9 310 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 PPP1R32Q7Z5V6 425 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 CUZD1Q86UP6 607 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 ZSCAN1Q8NBB4 408 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 MGARPQ8TDB4 240 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 SELENOMQ8WWX9 145 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 RGMAQ96B86 450 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 FAR2Q96K12 515 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 KCNC2Q96PR1 638 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 TBCDQ9BTW9 1192 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 LANCL2Q9NS86 450 aa15.13■□□□□ 0.01
USP39-205ENST00000442708 KCMF1Q9P0J7 381 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms