RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 FEN1P39748 380 aaKnown RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 MTAPQ13126 283 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 TARDBPQ13148 414 aaKnown RBP eCLIP19.47■□□□□ 0.711e-7■■■□□ 15.9
SHOX2-203ENST00000441443 HNRNPA0Q13151 305 aaKnown RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ZXDCQ2QGD7 858 aaPredicted RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 DGKKQ5KSL6 1271 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 CCSAPQ6IQ19 270 aaPredicted RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 PLET1Q6UQ28 207 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 PRSS55Q6UWB4 352 aaPredicted RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 GLRX5Q86SX6 157 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ZBTB2Q8N680 514 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 OR4C15Q8NGM1 316 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 WDFY2Q96P53 400 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 FAM129BQ96TA1 746 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 COQ3Q9NZJ6 369 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ALG5Q9Y673 324 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ZFP37Q9Y6Q3 630 aaPredicted RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 F5H5T6 163 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 DPM1O60762 260 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ENTPD6O75354 484 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 CSO75390 466 aaKnown RBP19.47■□□□□ 0.71
SHOX2-203ENST00000441443 OAZ2O95190 189 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 GPR19Q15760 415 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 LIPKQ5VXJ0 399 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 PAQR6Q6TCH4 344 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 GPR155Q7Z3F1 870 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 CLN6Q9NWW5 311 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 RHCGQ9UBD6 479 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 PCDHB11Q9Y5F2 797 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 TET1Q8NFU7 2136 aa19.47■□□□□ 0.71
SHOX2-203ENST00000441443 ZNF670-ZNF695F2Z2N8 137 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 PRPS1L1P21108 318 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 MAPK1P28482 360 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 SELENOWP63302 87 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 DSC1Q08554 894 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 PLCZ1Q86YW0 608 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 DBF4BQ8NFT6 615 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 CCDC120Q96HB5 630 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 HHIPQ96QV1 700 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 ASB8Q9H765 288 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 C11orf16Q9NQ32 467 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 SLC35F4A4IF30 521 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 POU3F3P20264 500 aaPredicted RBP19.46■□□□□ 0.71
SHOX2-203ENST00000441443 ALAS2P22557 587 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 BNC1Q01954 994 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 SPHARQ15513 63 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
SHOX2-203ENST00000441443 ADGRG2Q8IZP9 1017 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 TTC9Q92623 222 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 GFM1Q96RP9 751 aaKnown RBP19.46■□□□□ 0.71
SHOX2-203ENST00000441443 SLC32A1Q9H598 525 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 PRM3Q9NNZ6 103 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 DNAJC27Q9NZQ0 273 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 MALT1Q9UDY8 824 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 LEUTXA8MZ59 168 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 FAM227AF5H4B4 570 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 H7C0S8 307 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 CDK2AP1O14519 115 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 RPIAP49247 311 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 LAMTOR1Q6IAA8 161 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 XKRXQ6PP77 449 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 BCDIN3DQ7Z5W3 292 aaKnown RBP19.46■□□□□ 0.71
SHOX2-203ENST00000441443 TMC8Q8IU68 726 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 BHMTQ93088 406 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 TCF25Q9BQ70 676 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 SLC23A1Q9UHI7 598 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 GREB1Q4ZG55 1949 aa19.46■□□□□ 0.71
SHOX2-203ENST00000441443 F11P03951 625 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 GAB1Q13480 694 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 DDX39BQ13838 428 aaKnown RBP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 NFE2L1Q14494 772 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 RGNQ15493 299 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 FAM9CQ8IZT9 166 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 ATP6V1C2Q8NEY4 427 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 POLR2J2Q9GZM3 115 aaKnown RBP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 STARD7Q9NQZ5 370 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 CNOT2Q9NZN8 540 aaKnown RBP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 NDRG2Q9UN36 371 aaKnown RBP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 ANXA5P08758 320 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 CHMP24386 653 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 HLA-DMAP28067 261 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 CRATP43155 626 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 ABRQ12979 859 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 LEXMQ3ZCV2 418 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 ESCO2Q56NI9 601 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 RTP2Q5QGT7 225 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 AQP11Q8NBQ7 271 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 OR9Q1Q8NGQ5 310 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 UBTD2Q8WUN7 234 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 SKA2Q8WVK7 121 aaPredicted RBP19.45■□□□□ 0.7
SHOX2-203ENST00000441443 MAGEH1Q9H213 219 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 PLXNA4Q9HCM2 1894 aa19.45■□□□□ 0.7
SHOX2-203ENST00000441443 A8MX80 341 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 MAN2A2P49641 1150 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 SRSF11Q05519 484 aaKnown RBP19.44■□□□□ 0.7
SHOX2-203ENST00000441443 TNK1Q13470 666 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 TAS1R1Q7RTX1 841 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 GPR65Q8IYL9 337 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 CPA6Q8N4T0 437 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms