RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-206	ENST00000441089	FAM76A	Q8TAV0	307 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	MGARP	Q8TDB4	240 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	HEXDC	Q8WVB3	486 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	FAR1	Q8WVX9	515 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	KCNJ9	Q92806	393 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	PTER	Q96BW5	349 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	MTFMT	Q96DP5	389 aa	Known RBP	4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	PEX11G	Q96HA9	241 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	AHCYL2	Q96HN2	611 aa	Known RBP	4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	C18orf12	Q96KH6	178 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	UBXN10	Q96LJ8	280 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	WDR92	Q96MX6	357 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	SMC6	Q96SB8	1091 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	SYT3	Q9BQG1	590 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	NUDT9	Q9BW91	350 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	TEX101	Q9BY14	249 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	STMN4	Q9H169	189 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	POPDC3	Q9HBV1	291 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	APMAP	Q9HDC9	416 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	KCNK9	Q9NPC2	374 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	SENP1	Q9P0U3	644 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	ATXN10	Q9UBB4	475 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	ST6GALNAC2	Q9UJ37	374 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	GNPTG	Q9UJJ9	305 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	NTNG1	Q9Y2I2	539 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	TMEM98	Q9Y2Y6	226 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	PLLP	Q9Y342	182 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	DHRS7	Q9Y394	339 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	OR1A2	Q9Y585	309 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	HCFC1	P51610	2035 aa		4.58	□□□□□ -1.68
PTPN4-206	ENST00000441089	WNK1	Q9H4A3	2382 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PCM1	Q15154	2024 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089		A0A087X1B8	175 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	SLC5A10	A0PJK1	596 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	NPEPPSL1	A6NEC2	478 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	RNF212B	A8MTL3	300 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089		A8MU76	341 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089		G3V2L1	256 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	MASP2	O00187	686 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CDC7	O00311	574 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	E2F3	O00716	465 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CHUK	O15111	745 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	ZBTB14	O43829	449 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	NPHS1	O60500	1241 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	GLRA3	O75311	464 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	VPS26A	O75436	327 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CDK14	O94921	469 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	AP2A2	O94973	939 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	KLHL2	O95198	593 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	GSTA1	P08263	222 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	LTA4H	P09960	611 aa	Known RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CCDC166	P0CW27	439 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CHRM3	P20309	590 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	MSH3	P20585	1137 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	AOAH	P28039	575 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PTPN4	P29074	926 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CSF2RB	P32927	897 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CRHR1	P34998	444 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PRLHR	P49683	370 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	SMS	P52788	366 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	SLC18A1	P54219	525 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	SLC12A2	P55011	1212 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	KIAA1024L	P59773	190 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	GUCY1A3	Q02108	690 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	TMEM115	Q12893	351 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	IL11RA	Q14626	422 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PCLAF	Q15004	111 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	OR4D1	Q15615	310 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	INSC	Q1MX18	579 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	TECRL	Q5HYJ1	363 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	NKAIN2	Q5VXU1	208 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	LRRC8E	Q6NSJ5	796 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CYB5D1	Q6P9G0	228 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CRIP3	Q6Q6R5	217 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	TMEM220	Q6QAJ8	160 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	WDR74	Q6RFH5	385 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	RAPH1	Q70E73	1250 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	MTERF4	Q7Z6M4	381 aa	Known RBP	4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	ISCA2	Q86U28	154 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	RASGRP3	Q8IV61	690 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	NAGS	Q8N159	534 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	ZADH2	Q8N4Q0	377 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	OR10G6	Q8NH81	332 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	GDAP1	Q8TB36	358 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CT55	Q8WUE5	264 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	EEF1AKMT1	Q8WVE0	214 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	OR1E3	Q8WZA6	343 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	DLG3	Q92796	817 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	ANAPC16	Q96DE5	110 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	LINGO1	Q96FE5	620 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	DCUN1D1	Q96GG9	259 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	CABS1	Q96KC9	395 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	PKNOX2	Q96KN3	472 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	FAM111A	Q96PZ2	611 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	ATOH8	Q96SQ7	321 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	TTC1	Q99614	292 aa		4.57	□□□□□ -1.68
PTPN4-206	ENST00000441089	APOO	Q9BUR5	198 aa		4.57	□□□□□ -1.68

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