RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 LCN1P1Q5VSP4 162 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 BHLHA9Q7RTU4 235 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 ZBTB44Q8NCP5 570 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 RIT1Q92963 219 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 PKP4Q99569 1192 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 TPT1P8Q9HAU6 139 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 POPDC3Q9HBV1 291 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 ELOVL2Q9NXB9 296 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 TNFRSF10DQ9UBN6 386 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 LOC285095A0A1B0GVY8 99 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GSAPA4D1B5 854 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 F5H5T6 163 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 HIST1H2AGP0C0S8 130 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 HIST1H2ADP20671 130 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 CNR2P34972 360 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GPC1P35052 558 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GGT2P36268 569 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 C1DQ13901 141 aaKnown RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 EFR3AQ14156 821 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GALEQ14376 348 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GPR68Q15743 365 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 FBXO43Q4G163 708 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 HIST1H2AHQ96KK5 128 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 SDHCQ99643 169 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 HIST1H2AJQ99878 128 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 H2AFJQ9BTM1 129 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 CLMPQ9H6B4 373 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 CTPS2Q9NRF8 586 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 NLE1Q9NVX2 485 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 SPIN1Q9Y657 262 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 ARL5CA6NH57 179 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ISM1B1AKI9 464 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CASKO14936 926 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 LRRTM2O43300 516 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 AOC2O75106 756 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ERP29P30040 261 aaKnown RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 GDI2P50395 445 aaKnown RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 KCNQ1P51787 676 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 IL10RBQ08334 325 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 KRT74Q7RTS7 529 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SERPINA9Q86WD7 417 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 AQP11Q8NBQ7 271 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SLC6A17Q9H1V8 727 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ALG5Q9Y673 324 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CIB4A0PJX0 185 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 MGAT4DA6NG13 374 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ATG13O75143 517 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 WISP3O95389 354 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 PEX11BO96011 259 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TRBC1P01850 177 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF7P17097 686 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SOX9P48436 509 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CSNK2BP67870 215 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ACSM2AQ08AH3 577 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TARDBPQ13148 414 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ACSM2BQ68CK6 577 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CASP12Q6UXS9 341 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TMIGD1Q6UXZ0 262 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 UMODL1-AS1Q8N2C9 162 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TINAGL1Q9GZM7 467 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ST3GAL5Q9UNP4 418 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SH3D21A4FU49 640 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 OR5K3A6NET4 321 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 B4DXG7 233 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 PCDH17O14917 1159 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ADAMDEC1O15204 470 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TSPAN12O95859 305 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 OLFM2O95897 454 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ATP6V1E1P36543 226 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 SERINC3Q13530 473 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 PCBP1Q15365 356 aaKnown RBP eCLIP11.25□□□□□ -0.619e-6■■□□□ 13.3
SMPD4-209ENST00000439886 ZNF124Q15973 351 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF551Q7Z340 670 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 DEFB132Q7Z7B7 95 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 OR4K1Q8NGD4 311 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-209ENST00000439886 MED8Q96G25 268 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 HRASLS5Q96KN8 279 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 FAM129BQ96TA1 746 aa11.25□□□□□ -0.61
SMPD4-209ENST00000439886 TTLL2Q9BWV7 592 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms