RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PLA2G16P53816 162 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 MFAP5Q13361 173 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 SLC29A2Q14542 456 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 LIPJQ5W064 366 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 PLAG1Q6DJT9 500 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 GRHL2Q6ISB3 625 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 Q6ZS92 163 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 ATCAYQ86WG3 371 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 IQCKQ8N0W5 287 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 CA13Q8N1Q1 262 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 Q8NA96 180 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 BRIX1Q8TDN6 353 aaKnown RBP23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 ADAMTS18Q8TE60 1221 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 MIB2Q96AX9 1013 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 CCDC77Q9BR77 488 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 ACTR8Q9H981 624 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 COPS7BQ9H9Q2 264 aaPredicted RBP23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 ZNF358Q9NW07 568 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 XPR1Q9UBH6 696 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 ADGRE2Q9UHX3 823 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 IGHV3-20A0A0C4DH32 117 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 IQANK1A0A1B0GTG1 560 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 PRMT3O60678 531 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 UGDHO60701 494 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 DNAJB6O75190 326 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 PCNAP12004 261 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 ACTN3Q08043 901 aaPredicted RBP23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 RCN2Q14257 317 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 EXT1Q16394 746 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 TIFABQ6ZNK6 161 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 LINC00696Q6ZRV3 163 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 MYLK4Q86YV6 388 aaPredicted RBP23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 ARMC2Q8NEN0 867 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 KCNC2Q96PR1 638 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 SERINC2Q96SA4 455 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 LPAR4Q99677 370 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 MRPL57Q9BQC6 102 aaKnown RBP23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 ROGDIQ9GZN7 287 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 MRPL46Q9H2W6 279 aaKnown RBP23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 LUZP4Q9P127 313 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 PTGFRNQ9P2B2 879 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 TEKT2Q9UIF3 430 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 NBASA2RRP1 2371 aa23.27■■□□□ 1.32
RAPGEF1-206ENST00000438647 A0A0G2JN53 185 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 STX16-NPEPL1H3BU86 382 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 STX16O14662 325 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 TBX6O95947 436 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 GCAP28676 217 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 TNFRSF8P28908 595 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 SOX11P35716 441 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 MTTPP55157 894 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 OR4D2P58180 307 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 GTF2H2Q13888 395 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 IGFBP7Q16270 282 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 BTBD16Q32M84 506 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PLEKHN1Q494U1 663 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 TMEM35AQ53FP2 167 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 SFT2D3Q587I9 215 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 ADNP2Q6IQ32 1131 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 GTF2H2CQ6P1K8 395 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 ABHD17CQ6PCB6 329 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 CHSY3Q70JA7 882 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 LCA5Q86VQ0 697 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 GSPT2Q8IYD1 628 aaKnown RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PTGR2Q8N8N7 351 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 OR7G3Q8NG95 312 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 ZNF473Q8WTR7 871 aaKnown RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PSMF1Q92530 271 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 TSLPQ969D9 159 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 REPS1Q96D71 796 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PTCHD1Q96NR3 888 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 MS4A8Q9BY19 250 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PRDM9Q9NQV7 894 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PSMC3IPQ9P2W1 217 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PLAAQ9Y263 795 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 MRPS33Q9Y291 106 aaKnown RBP23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 MMACHCQ9Y4U1 282 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 PCDHGA11Q9Y5H2 935 aa23.26■■□□□ 1.31
RAPGEF1-206ENST00000438647 CNTRLQ7Z7A1 2325 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 DYTNA2CJ06 578 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 ITGAMP11215 1152 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 INPP5JQ15735 1006 aaPredicted RBP23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 PAPD4Q6PIY7 484 aaKnown RBP23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 GOLGA7Q7Z5G4 137 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 SIRT6Q8N6T7 355 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 DNAJB14Q8TBM8 379 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 PHF21BQ96EK2 531 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 CMTM7Q96FZ5 175 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 QRFPRQ96P65 431 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 F2RL3Q96RI0 385 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 CENPKQ9BS16 269 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 IPPKQ9H8X2 491 aa23.25■■□□□ 1.31
RAPGEF1-206ENST00000438647 MYO18BQ8IUG5 2567 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 E2F3O00716 465 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 SIX3O95343 332 aaPredicted RBP23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 CELA2AP08217 269 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 EEF1DP29692 281 aaKnown RBP23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 PIK3CBP42338 1070 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 RAB38P57729 211 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms