RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 C4orf51C9J302 202 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PRMT3O60678 531 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 SMIM24O75264 130 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PCNAP12004 261 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 SERPINB1P30740 379 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PLA2G16P53816 162 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 MFAP5Q13361 173 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 GTF2H2Q13888 395 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 SLC29A2Q14542 456 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ADPRMQ3LIE5 342 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PLEKHN1Q494U1 663 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ADNP2Q6IQ32 1131 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 GRHL2Q6ISB3 625 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 GTF2H2CQ6P1K8 395 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 METTL2BQ6P1Q9 378 aaKnown RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ADGRD1Q6QNK2 874 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 QSOX2Q6ZRP7 698 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ATCAYQ86WG3 371 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 MYLK4Q86YV6 388 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 GSPT2Q8IYD1 628 aaKnown RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 IQCKQ8N0W5 287 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 CNPY4Q8N129 248 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 CA13Q8N1Q1 262 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 SIRT6Q8N6T7 355 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PTGR2Q8N8N7 351 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 Q8NA96 180 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 SRFBP1Q8NEF9 429 aaKnown RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ARMC2Q8NEN0 867 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 TSLPQ969D9 159 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 MIB2Q96AX9 1013 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PTCHD1Q96NR3 888 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 CCDC77Q9BR77 488 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 TXLNGYQ9BZA5 131 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ACTR8Q9H981 624 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 COPS7BQ9H9Q2 264 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-201ENST00000437679 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 ADGRE2Q9UHX3 823 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 PLAAQ9Y263 795 aa14.3□□□□□ -0.12
LIMS3-201ENST00000437679 IQANK1A0A1B0GTG1 560 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 UGDHO60701 494 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-201ENST00000437679 CELA2AP08217 269 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 ITGAMP11215 1152 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 GCAP28676 217 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 MTTPP55157 894 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 OR4D2P58180 307 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 RCN2Q14257 317 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 INPP5JQ15735 1006 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-201ENST00000437679 EXT1Q16394 746 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 BTBD16Q32M84 506 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 SFT2D3Q587I9 215 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 LIPJQ5W064 366 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 PLAG1Q6DJT9 500 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 ABHD17CQ6PCB6 329 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 PAPD4Q6PIY7 484 aaKnown RBP14.29□□□□□ -0.12
LIMS3-201ENST00000437679 TIFABQ6ZNK6 161 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 Q6ZS92 163 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 CHSY3Q70JA7 882 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 LAS2Q8IYD9 372 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 OR7G3Q8NG95 312 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 ADAMTS18Q8TE60 1221 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 ZNF473Q8WTR7 871 aaKnown RBP14.29□□□□□ -0.12
LIMS3-201ENST00000437679 PSMF1Q92530 271 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 PHF21BQ96EK2 531 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 F2RL3Q96RI0 385 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 SERINC2Q96SA4 455 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 LPAR4Q99677 370 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 MRPL57Q9BQC6 102 aaKnown RBP14.29□□□□□ -0.12
LIMS3-201ENST00000437679 ROGDIQ9GZN7 287 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 IPPKQ9H8X2 491 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 PRDM9Q9NQV7 894 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 MAP10Q9P2G4 905 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 FETUBQ9UGM5 382 aa14.29□□□□□ -0.12
LIMS3-201ENST00000437679 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 LRRC14BA6NHZ5 514 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 FAM227AF5H4B4 570 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 STX16-NPEPL1H3BU86 382 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 STX16O14662 325 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 VPS4BO75351 444 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 SIX3O95343 332 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-201ENST00000437679 EEF1DP29692 281 aaKnown RBP14.28□□□□□ -0.12
LIMS3-201ENST00000437679 SOX11P35716 441 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 ARL1P40616 181 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-201ENST00000437679 RAB38P57729 211 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 ARG2P78540 354 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 BTG2P78543 158 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 PHEXP78562 749 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 DDX39BQ13838 428 aaKnown RBP14.28□□□□□ -0.12
LIMS3-201ENST00000437679 RUNX2Q13950 521 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 TMEM35AQ53FP2 167 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 TENM4Q6N022 2769 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 GOLGA7Q7Z5G4 137 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 ATP6V1E2Q96A05 226 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 REPS1Q96D71 796 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 CMTM7Q96FZ5 175 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 CNDP1Q96KN2 507 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 QRFPRQ96P65 431 aa14.28□□□□□ -0.12
LIMS3-201ENST00000437679 KCNC2Q96PR1 638 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms