RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CAMKK1Q8N5S9 505 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 CADM4Q8NFZ8 388 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 FAM120BQ96EK7 910 aaKnown RBP20.13■□□□□ 0.81
PTPRF-207ENST00000436724 POT1Q9NUX5 634 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 MAGEL2Q9UJ55 1249 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 PCDHGA4Q9Y5G9 962 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 EML5Q05BV3 1969 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 SPAG17Q6Q759 2223 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 CACNA1IQ9P0X4 2223 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 B4DGG1 531 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 K7ESF4 209 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PABPC4LP0CB38 370 aaKnown RBP20.12■□□□□ 0.81
PTPRF-207ENST00000436724 UGT2B7P16662 529 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PSMA4P25789 261 aaKnown RBP20.12■□□□□ 0.81
PTPRF-207ENST00000436724 CXCL12P48061 93 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 GAB1Q13480 694 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 TBCELQ5QJ74 424 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 ZNF793Q6ZN11 406 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PROSER1Q86XN7 944 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 VPS37AQ8NEZ2 397 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 TTLQ8NG68 377 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 TM4SF18Q96CE8 201 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 NSMCE2Q96MF7 247 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 BHLHE41Q9C0J9 482 aaPredicted RBP20.12■□□□□ 0.81
PTPRF-207ENST00000436724 Q9H521 79 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 MIEF1Q9NQG6 463 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 C5AR2Q9P296 337 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 BTNL2Q9UIR0 455 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 SNX7Q9UNH6 387 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 MAPRE3Q9UPY8 281 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 AP1M2Q9Y6Q5 423 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 VPS13AQ96RL7 3174 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 ELOVL7A1L3X0 281 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 ZNF26P17031 533 aaPredicted RBP20.12■□□□□ 0.81
PTPRF-207ENST00000436724 HBA1P69905 142 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 GK3PQ14409 553 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 ZIC1Q15915 447 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 HMBOX1Q6NT76 420 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PAGE2Q7Z2X7 111 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 DGLUCYQ7Z3D6 616 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PAQR7Q86WK9 346 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 NUDT13Q86X67 352 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 CALHM3Q86XJ0 350 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 UBALD2Q8IYN6 164 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 ZFAND2BQ8WV99 257 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 PPWD1Q96BP3 646 aaKnown RBP20.12■□□□□ 0.81
PTPRF-207ENST00000436724 SEPHS2Q99611 448 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 SLC6A16Q9GZN6 736 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 TM9SF3Q9HD45 589 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 AK5Q9Y6K8 562 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 CEP192Q8TEP8 1941 aa20.12■□□□□ 0.81
PTPRF-207ENST00000436724 KIR2DS5A0A0G2JLQ3 304 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 A0A0G2JNG1 304 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 KIR2DS3K7RE56 304 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 TLR4O00206 839 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 RNASET2O00584 256 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 GSTA4O15217 222 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 EPN2O95208 641 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 C6orf47O95873 294 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 GSTT1P30711 240 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ALDH9A1P49189 494 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 RACK1P63244 317 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 KIR2DS3Q14952 304 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 KIR2DS5Q14953 304 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ANXA8L1Q5VT79 327 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 CWF19L1Q69YN2 538 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 OR4C11Q6IEV9 310 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 R3HCC1LQ7Z5L2 792 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 OR4A15Q8NGL6 344 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ZDHHC1Q8WTX9 485 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 UCN3Q969E3 161 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 SLC22A18Q96BI1 424 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 SARGQ9BW04 601 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ARMC1Q9NVT9 282 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 TEX10Q9NXF1 929 aaPredicted RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ACTR10Q9NZ32 417 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 CNOT11Q9UKZ1 510 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 A0A0C4DFX4 3053 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ZW10O43264 779 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ERI3O43414 337 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 PRAMEF10O60809 474 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 MT-ND1P03886 318 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 CSF2P04141 144 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 AHRP35869 848 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 SSR2P43308 183 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 RPS9P46781 194 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ROR2Q01974 943 aaKnown RBP20.11■□□□□ 0.81
PTPRF-207ENST00000436724 TJAP1Q5JTD0 557 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 C6orf52Q5T4I8 152 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 MICU2Q8IYU8 434 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 NCSTNQ92542 709 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 MS4A6EQ96DS6 147 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 TWSG1Q9GZX9 223 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 TPT1P8Q9HAU6 139 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 ATAD3AQ9NVI7 634 aa20.11■□□□□ 0.81
PTPRF-207ENST00000436724 C1orf226A1L170 272 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 FAM149AA5PLN7 773 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 NTRK1P04629 796 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 HNRNPFP52597 415 aaKnown RBP20.1■□□□□ 0.81
PTPRF-207ENST00000436724 PPP1CAP62136 330 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms