RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 APIPQ96GX9 242 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 AHCYL2Q96HN2 611 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CNDP2Q96KP4 475 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 MARK4Q96L34 752 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 PPP3R2Q96LZ3 170 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 MACROD1Q9BQ69 325 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CCDC3Q9BQI4 270 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NUDT22Q9BRQ3 303 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 EDEM2Q9BV94 578 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NMUR2Q9GZQ4 415 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 AICDAQ9GZX7 198 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 OR51B5Q9H339 312 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 BRF2Q9HAW0 419 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 LRTM1Q9HBL6 345 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 FAM60AQ9NP50 221 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SAR1AQ9NR31 198 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 C1GALT1Q9NS00 363 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 C1orf109Q9NX04 203 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NCDNQ9UBB6 729 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 VPS29Q9UBQ0 182 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ADGRE2Q9UHX3 823 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ZFP69BQ9UJL9 534 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 G3BP2Q9UN86 482 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC12A4Q9UP95 1085 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 AP1M2Q9Y6Q5 423 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 MUC3AQ02505 3323 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 TRBV23-1A0A0A0MS06 115 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 IGHV5-51A0A0C4DH38 117 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 A0A0J9YVX5 310 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 LRIT2A6NDA9 550 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 TLCD2A6NGC4 264 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ANKDD1BA6NHY2 528 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CCT8L1PA6NM43 557 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 C4orf47A7E2U8 309 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 PROB1E7EW31 1015 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SAP18O00422 153 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 UBDO15205 165 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DUX1O43812 170 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CCDC22O60826 627 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CBFA2T3O75081 653 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SH3BGRLO75368 114 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SEC22BO75396 215 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DCTN3O75935 186 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 KLHL18O94889 574 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 TIAF1O95411 115 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 LDOC1O95751 146 aaPredicted RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 STATHP02808 62 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 RPLP0P05388 317 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SERPINA6P08185 405 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CKMT2P17540 419 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 NCF2P19878 526 aaPredicted RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 PTX3P26022 381 aaPredicted RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 GSTM2P28161 218 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 HNRNPH1P31943 449 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 GRK3P35626 688 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 AHRP35869 848 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 GABRA4P48169 554 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DUSP3P51452 185 aaPredicted RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DIO3P55073 304 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 RPS15AP62244 130 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ERVK-8P63133 956 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SNRPNP63162 240 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 RAE1P78406 368 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CYP4F3Q08477 520 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CUL3Q13618 768 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 NAA25Q14CX7 972 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 IMPG1Q17R60 797 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SMU1Q2TAY7 513 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 INAVAQ3KP66 663 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ADPRMQ3LIE5 342 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 GALNTL6Q49A17 601 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ATP6AP1LQ52LC2 224 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DEPDC1Q5TB30 811 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 IL23RQ5VWK5 629 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 KHDRBS2Q5VWX1 349 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 FRMPD2BQ6IN97 320 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 RNF44Q7L0R7 432 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CLNKQ7Z7G1 428 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 THNSL2Q86YJ6 484 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 PLXDC1Q8IUK5 500 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CARFQ8N187 725 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DNAJC22Q8N4W6 341 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 IFI44Q8TCB0 444 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CMTM7Q96FZ5 175 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 TCTN2Q96GX1 697 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 FCRL1Q96LA6 429 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CATSPER2Q96P56 530 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 F2RL3Q96RI0 385 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CD180Q99467 661 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SERPINI1Q99574 410 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ZFYVE21Q9BQ24 234 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 C1orf50Q9BV19 199 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 CCDC106Q9BWC9 280 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 MS4A8Q9BY19 250 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 MRPL1Q9BYD6 325 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 MRPL18Q9H0U6 180 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 LRRN3Q9H3W5 708 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms