RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 KLHL31Q9H511 634 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 NPDC1Q9NQX5 325 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 PPT2Q9UMR5 302 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 PPP2R2CQ9Y2T4 447 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 MMACHCQ9Y4U1 282 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 HRH3Q9Y5N1 445 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 MTORP42345 2549 aa10.22□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TRBV11-1A0A0K0K1C0 115 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 URADA6NGE7 173 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 FCHO1O14526 889 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 DNALI1O14645 258 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TFECO14948 347 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 GUCA1CO95843 209 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TBX6O95947 436 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 SERPIND1P05546 499 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 IVDP26440 423 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 PTGS2P35354 604 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CLCN2P51788 898 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 RAB8AP61006 207 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CDKL1Q00532 357 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TLE4Q04727 773 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 FRG1Q14331 258 aaKnown RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 STEAP4Q687X5 459 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 FAM45BPQ6NSW5 357 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TRMT10BQ6PF06 316 aaKnown RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 KLHDC8AQ8IYD2 350 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TRPV3Q8NET8 790 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 GABPB2Q8TAK5 448 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 FAM45AQ8TCE6 357 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 GRK7Q8WTQ7 553 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CA5BP1Q8WTZ4 195 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 ANKRD7Q92527 254 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 NAP1L3Q99457 506 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 AIF1LQ9BQI0 150 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 VWA7Q9Y334 891 aa10.21□□□□□ -0.77
SPTLC1P4-201ENST00000435997 A0A1B0GTH9 108 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TMEM200CA6NKL6 621 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 KLRC4-KLRK1H3BQV0 150 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PSMD12O00232 456 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 NRDCO43847 1150 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PEX1O43933 1283 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HS6ST1O60243 411 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PRKNO60260 465 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 ITGA10O75578 1167 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 MYO1DO94832 1006 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 GSTM2P28161 218 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 MSX1P28360 303 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 ADPRMQ3LIE5 342 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 BBS9Q3SYG4 887 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 EMC4Q5J8M3 183 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 ARHGAP11AQ6P4F7 1023 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 MEX3BQ6ZN04 569 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 MDGA2Q7Z553 956 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 THOC6Q86W42 341 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 CYP4Z2PQ8N1L4 340 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 GPATCH11Q8N954 259 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 ARMC2Q8NEN0 867 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 CHTF18Q8WVB6 975 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 VMP1Q96GC9 406 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 SEC16BQ96JE7 1060 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PDLIM2Q96JY6 352 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TRIM54Q9BYV2 358 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 DEFB126Q9BYW3 111 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 ZDHHC11Q9H8X9 412 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 DEPPQ9NTK1 212 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TNFRSF10DQ9UBN6 386 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 SLC22A14Q9Y267 594 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 KCNE2Q9Y6J6 123 aa10.2□□□□□ -0.78
SPTLC1P4-201ENST00000435997 LRIT2A6NDA9 550 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 NPEPPSL1A6NEC2 478 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 CES2O00748 559 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 FANCGO15287 622 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TOXO94900 526 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 WISP3O95389 354 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TUBB4AP04350 444 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PPP2R1BP30154 601 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HNRNPH1P31943 449 aaKnown RBP10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 RFC3P40938 356 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HNF4AP41235 474 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 SLC6A12P48065 614 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HNMTP50135 292 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 NR0B1P51843 470 aaKnown RBP10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HNRNPFP52597 415 aaKnown RBP10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 HSD17B7P56937 341 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 RAB38P57729 211 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 GPR85P60893 370 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 RUNX2Q13950 521 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 SLCO4C1Q6ZQN7 724 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 VN1R5Q7Z5H4 357 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 GPALPP1Q8IXQ4 340 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 RPRMLQ8N4K4 120 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 PSD4Q8NDX1 1056 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 TMEM52Q8NDY8 209 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 OR52N2Q8NGI0 321 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 NCLNQ969V3 563 aa10.19□□□□□ -0.78
SPTLC1P4-201ENST00000435997 MS4A6EQ96DS6 147 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms