RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GPR85P60893 370 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ARF5P84085 180 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PPIGQ13427 754 aaKnown RBP eCLIP7.18□□□□□ -1.267e-10■□□□□ 9.9
CPSF6-202ENST00000435070 HKDC1Q2TB90 917 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF782Q6ZMW2 699 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TRILQ7L0X0 811 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 LIX1LQ8IVB5 337 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 C10orf53Q8N6V4 93 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 OR4K2Q8NGD2 314 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CREB3L4Q8TEY5 395 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 KLHL15Q96M94 604 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GPR20Q99678 358 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TCF25Q9BQ70 676 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 EBPLQ9BY08 206 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 DERL2Q9GZP9 239 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SLC25A51Q9H1U9 297 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SLC28A3Q9HAS3 691 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 UBQLN2Q9UHD9 624 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MED16Q9Y2X0 877 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ACTL7AQ9Y615 435 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PIPSLA2A3N6 862 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ADAMDEC1O15204 470 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ENTPD6O75354 484 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 DCDC1P59894 354 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 IL2P60568 153 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 VMACQ2NL98 169 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 IQCCQ4KMZ1 466 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CRTC2Q53ET0 693 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ARHGAP15Q53QZ3 475 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 FAM124AQ86V42 546 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 TEX19Q8NA77 164 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 OR52H1Q8NGJ2 320 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF382Q96SR6 550 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GABARAPL1Q9H0R8 117 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 R3HDMLQ9H3Y0 253 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GPBP1L1Q9HC44 474 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 B3GAT2Q9NPZ5 323 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 HACL1Q9UJ83 578 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 MAFFQ9ULX9 164 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 BAIAP2Q9UQB8 552 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 TTC3P53804 2025 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 A0A0A6YYJ9 748 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 J3KTA2 159 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RFXAPO00287 272 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GPR182O15218 404 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RGS14O43566 566 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RGS11O94810 467 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 MPC2O95563 127 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 IGFBP1P08833 259 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ACSM4P0C7M7 580 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 MPPE1Q53F39 396 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 FAHD1Q6P587 224 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 BBS7Q8IWZ6 715 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PSMG2Q969U7 264 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CHIAQ9BZP6 476 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CD244Q9BZW8 370 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PCDHGB3Q9Y5G1 929 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SPIN1Q9Y657 262 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RPS10-NUDT3A0A1W2PQS6 291 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 TCRBV16S1A1N1A0A5B0 115 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF98A6NK75 572 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 OR7A17O14581 309 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 IFNA7P01567 189 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LHCGRP22888 699 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CRYBB2P43320 205 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 OR1G1P47890 313 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CLCNKAP51800 687 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 AGFG1P52594 562 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 STC1P52823 247 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CBFBQ13951 182 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 EXOC3L2Q2M3D2 409 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LRFN4Q6PJG9 635 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 FBXO16Q8IX29 292 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 OR52P1PQ8NH57 321 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CDKN2AIPNLQ96HQ2 116 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SMOQ99835 787 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 FAM126AQ9BYI3 521 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RNF39Q9H2S5 420 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 A0A1W2PPL8 197 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GSAPA4D1B5 854 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF670-ZNF695F2Z2N8 137 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CASKO14936 926 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CHP2O43745 196 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LRG1P02750 347 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RPS14P62263 151 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SCAPQ12770 1279 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZRANB3Q5FWF4 1079 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PLAG1Q6DJT9 500 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 REPS2Q8NFH8 660 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RNASE11Q8TAA1 199 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 MARVELD3Q96A59 401 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PPP1R2P1Q96PQ5 205 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RTP3Q9BQQ7 232 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LINC00597Q9H2U6 94 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms