RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MED27Q6P2C8 311 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 KIRREL2Q6UWL6 708 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 TIFABQ6ZNK6 161 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MED25Q71SY5 747 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ABHD13Q7L211 337 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 LRRC70Q7Z2Q7 622 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 VN1R5Q7Z5H4 357 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCDC91Q7Z6B0 441 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF605Q86T29 641 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 APLFQ8IW19 511 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 KLHDC8AQ8IYD2 350 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 GALNT16Q8N428 558 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF843Q8N446 348 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM151AQ8N4L1 468 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 LSM14AQ8ND56 463 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 FDCSPQ8NFU4 85 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 C9orf43Q8TAL5 461 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 PPP4R1Q8TF05 950 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 METTL21AQ8WXB1 218 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ISL2Q96A47 359 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 FKBP10Q96AY3 582 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MS4A6EQ96DS6 147 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MTBPQ96DY7 904 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MVB12AQ96EY5 273 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 WBP1Q96G27 269 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 THOC3Q96J01 351 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 FER1L6-AS2Q96M78 137 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 NSUN5Q96P11 429 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MTERF1Q99551 399 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MRPL57Q9BQC6 102 aaKnown RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 EFCAB11Q9BUY7 163 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC25A23Q9BV35 468 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SARGQ9BW04 601 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 AICDAQ9GZX7 198 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC25A18Q9H1K4 315 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC26A1Q9H2B4 701 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 NT5DC2Q9H857 520 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF160Q9HCG1 818 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 MKKSQ9NPJ1 570 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 ENAMQ9NRM1 1142 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SEMA3GQ9NS98 782 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 DCDC2Q9UHG0 476 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 RNF11Q9Y3C5 154 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC22A7Q9Y694 548 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 NUP210LQ5VU65 1888 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 CHD8Q9HCK8 2581 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 IGF2RP11717 2491 aa5.45□□□□□ -1.54
HMGB3P24-201ENST00000433260 IGLV3-12A0A075B6K2 115 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 NSG1A0A0A6YYJ2 146 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ANKRD33BA6NCL7 494 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 LRIT2A6NDA9 550 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 A8MT66 165 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 A8MUI8 341 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 B8ZZF3 427 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 C4orf51C9J302 202 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 RTCAO00442 366 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 E2F3O00716 465 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 COPEO14579 308 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR7A17O14581 309 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ERI3O43414 337 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 DLX3O60479 287 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLEC3AO75596 197 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 SUPT7LO94864 414 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLDN9O95484 217 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TBX6O95947 436 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 SERPINA6P08185 405 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CELA2AP08217 269 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 SMIM10L1P0DMW3 83 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ARAFP10398 606 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ACPPP15309 386 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 KRT4P19013 534 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ADH6P28332 368 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 HNRNPH1P31943 449 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCT5P48643 541 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ST13P50502 369 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCNG1P51959 295 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 EFNA3P52797 238 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 STXBP1P61764 594 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 RPS13P62277 151 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ACTN3Q08043 901 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 HERC3Q15034 1050 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZRSR2Q15696 482 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TBCCQ15814 346 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TUBB8Q3ZCM7 444 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 NADK2Q4G0N4 442 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 UNC50Q53HI1 259 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 PAGE2BQ5JRK9 111 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 LIPJQ5W064 366 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 GRHL2Q6ISB3 625 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDR93Q6P2C0 686 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TRIM40Q6P9F5 258 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 LINC00696Q6ZRV3 163 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 LANCL3Q6ZV70 420 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ASB18Q6ZVZ8 466 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 MILR1Q7Z6M3 343 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 MRGPREQ86SM8 312 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 C4orf33Q8N1A6 199 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CA13Q8N1Q1 262 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM102Q8N9M5 508 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms