RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GAL3ST3Q96A11 431 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 KCNC2Q96PR1 638 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TBCDQ9BTW9 1192 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 DDX31Q9H8H2 851 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 MYNNQ9NPC7 610 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 LHX9Q9NQ69 397 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CFAP73A6NFT4 308 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 C9JVG2 144 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 ANKRD65E5RJM6 399 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 H0YGG7 62 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 CFLARO15519 480 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 PRAMEF10O60809 474 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 EEDO75530 441 aaKnown RBP17.35■□□□□ 0.37
HMGN1-206ENST00000431390 CKMT1AP12532 417 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 ARF3P61204 181 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-206ENST00000431390 SIM1P81133 766 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-206ENST00000431390 CCNYL2Q5T2Q4 361 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 FRMPD2BQ6IN97 320 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 ABHD17CQ6PCB6 329 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 HACD2Q6Y1H2 254 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 DBX2Q6ZNG2 339 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 IKBIPQ70UQ0 350 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 DNAJC22Q8N4W6 341 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 KRTCAP2Q8N6L1 136 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-206ENST00000431390 NPAS2Q99743 824 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 KLHL31Q9H511 634 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 FAM60AQ9NP50 221 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 SEMA5BQ9P283 1151 aa17.35■□□□□ 0.37
HMGN1-206ENST00000431390 LEF1Q9UJU2 399 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-206ENST00000431390 ARHGAP10A1A4S6 786 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 CPED1A4D0V7 1026 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 RTCAO00442 366 aaKnown RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 MRASO14807 208 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ZSCAN9O15535 394 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ERI3O43414 337 aaKnown RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 KIF1CO43896 1103 aaKnown RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 KLHL18O94889 574 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ZBTB11O95625 1053 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ITGAXP20702 1163 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 CSF2RBP32927 897 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 SSR2P43308 183 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 TRA2BP62995 288 aaKnown RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 CFHR1Q03591 330 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ART3Q13508 389 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 AMZ1Q400G9 498 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ZFYVE26Q68DK2 2539 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 C16orf89Q6UX73 402 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 C16orf78Q8WTQ4 265 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ROPN1LQ96C74 230 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 MACROD1Q9BQ69 325 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 SORBS1Q9BX66 1292 aaKnown RBP17.34■□□□□ 0.37
HMGN1-206ENST00000431390 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 LHX6Q9UPM6 363 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 MSRB2Q9Y3D2 182 aa17.34■□□□□ 0.37
HMGN1-206ENST00000431390 COL5A1P20908 1838 aaPredicted RBP17.33■□□□□ 0.37
HMGN1-206ENST00000431390 LOC105369274A0A096LPK9 316 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 IGHV5-51A0A0C4DH38 117 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 LOC102723532A0A0G2JNH3 316 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 P2RX6O15547 441 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 MAP3K7O43318 606 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 SRPX2O60687 465 aaPredicted RBP17.33■□□□□ 0.37
HMGN1-206ENST00000431390 SCELO95171 688 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 STATHP02808 62 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 GBAP04062 536 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 HPCAL1P37235 193 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 RPL3P39023 403 aaKnown RBP17.33■□□□□ 0.37
HMGN1-206ENST00000431390 GRK6P43250 576 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 MAPK12P53778 367 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PLA2G16P53816 162 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 SLC25A3Q00325 362 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 SRSF11Q05519 484 aaKnown RBP17.33■□□□□ 0.37
HMGN1-206ENST00000431390 TLR1Q15399 786 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 HKDC1Q2TB90 917 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 FAM174BQ3ZCQ3 159 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 TIGD2Q4W5G0 525 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 SPANXN4Q5MJ08 99 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PERM1Q5SV97 790 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PRSS42Q7Z5A4 293 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 CAMKMTQ7Z624 323 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PIP4P1Q86T03 277 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 RETREG3Q86VR2 466 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 DSELQ8IZU8 1212 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 OR4N4Q8N0Y3 316 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 TMEM132CQ8N3T6 1108 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 KIF2BQ8N4N8 673 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 VPS33AQ96AX1 596 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 TEFMQ96QE5 360 aaKnown RBP17.33■□□□□ 0.37
HMGN1-206ENST00000431390 CCDC3Q9BQI4 270 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 NLNQ9BYT8 704 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 ROGDIQ9GZN7 287 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PDE7BQ9NP56 450 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 PRDM7Q9NQW5 492 aa17.33■□□□□ 0.37
HMGN1-206ENST00000431390 RP1P56715 2156 aa17.33■□□□□ 0.36
HMGN1-206ENST00000431390 PKD1L2Q7Z442 2459 aa17.33■□□□□ 0.36
HMGN1-206ENST00000431390 ADAMTS20P59510 1910 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 A0A0A6YYD5 115 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ASPDHA6ND91 283 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms