RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 SIX1Q15475 284 aaPredicted RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 NNATQ16517 81 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 PPP1R3AQ16821 1122 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 RFTN2Q52LD8 501 aaPredicted RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 LIPJQ5W064 366 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 RFLNAQ6ZTI6 216 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 HMGN2P46Q86SG4 172 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 STX12Q86Y82 276 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 OR4N5Q8IXE1 308 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 PGBD5Q8N414 524 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 EFHD2Q96C19 240 aaPredicted RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 ZCCHC3Q9NUD5 404 aaKnown RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 MTMR10Q9NXD2 777 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 NKX1-2Q9UD57 310 aaPredicted RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 COLQQ9Y215 455 aaPredicted RBP6.84□□□□□ -1.32
ATXN3-204ENST00000429774 NME7Q9Y5B8 376 aa6.84□□□□□ -1.32
ATXN3-204ENST00000429774 BOLA2-SMG1P6H3BVE0 249 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PDLIM1O00151 329 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CAPN5O15484 640 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 B4GALT3O60512 393 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DNAJB1P25685 340 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 HOXA9P31269 272 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CTHP32929 405 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 AQP4P55087 323 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 IL18R1Q13478 541 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 OR4C11Q6IEV9 310 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 LRRC17Q8N6Y2 441 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PHOSPHO1Q8TCT1 267 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 TEFMQ96QE5 360 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 TMEM168Q9H0V1 697 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 LYARQ9NX58 379 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PADI2Q9Y2J8 665 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ARHGEF33A8MVX0 844 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 E7EQ34 232 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CXCR6O00574 342 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 TFECO14948 347 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 GABBR2O75899 941 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PRPS1L1P21108 318 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 KCNC1P48547 511 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DSTNP60981 165 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CATSPEREQ5SY80 951 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DCST1Q5T197 706 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 TMEM107Q6UX40 140 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SAMD14Q8IZD0 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ZDHHC14Q8IZN3 488 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SMYD1Q8NB12 490 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 C11orf65Q8NCR3 313 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SETD9Q8NE22 299 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PIK3C3Q8NEB9 887 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 OR10H5Q8NGA6 315 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 FCRL4Q96PJ5 515 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 OR52B2Q96RD2 323 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 MACROD1Q9BQ69 325 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DUSP23Q9BVJ7 150 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ACTR10Q9NZ32 417 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PARP14Q460N5 1801 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CXCR1P25024 350 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 BCAP31P51572 246 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 MAZP56270 477 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DUOXA1Q1HG43 343 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 KDELC1Q6UW63 502 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 KRTCAP2Q8N6L1 136 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ART5Q96L15 291 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CHMP1AQ9HD42 196 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 NECTIN3Q9NQS3 549 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CALML5Q9NZT1 146 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 P2RX2Q9UBL9 471 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 PSMA3P25788 255 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SLC7A1P30825 629 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 RAB28P51157 221 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 EIPR1Q53HC9 387 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ZNF789Q5FWF6 425 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 HMBOX1Q6NT76 420 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SYVN1Q86TM6 617 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 MINDY2Q8NBR6 621 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 OR4K1Q8NGD4 311 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ZHX1-C8orf76Q96EF9 292 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SH3YL1Q96HL8 342 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CAMK1GQ96NX5 476 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 SLITRK2Q9H156 845 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DENND2DQ9H6A0 471 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DLGAP4Q9Y2H0 992 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ELOA3DA6NLF2 546 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 STARP49675 285 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 AFF3P51826 1226 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CDH12P55289 794 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
ATXN3-204ENST00000429774 GBX1Q14549 363 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 HERC3Q15034 1050 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 DECR1Q16698 335 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 FAM214AQ32MH5 1076 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ELOA3BQ3SY89 546 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 NRROSQ86YC3 692 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 NLGN4XQ8N0W4 816 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 CNTD1Q8N815 330 aa6.83□□□□□ -1.32
ATXN3-204ENST00000429774 ELOA3Q8NG57 546 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms