RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 VIPR1P32241 457 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CD70P32970 193 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 AVPR1BP47901 424 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CRISP1P54107 249 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ISL1P61371 349 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 RGNQ15493 299 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 KCNJ8Q15842 424 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 BRAT1Q6PJG6 821 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TAS1R1Q7RTX1 841 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 MYEOVQ96EZ4 313 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CCDC115Q96NT0 180 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TRMT61BQ9BVS5 477 aaKnown RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 C3orf14Q9HBI5 128 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 SMURF1Q9HCE7 757 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TAC3Q9UHF0 121 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 GPSM3Q9Y4H4 160 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 INSL5Q9Y5Q6 135 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 IRGMA1A4Y4 181 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 AGAP5A6NIR3 686 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 POP7O75817 140 aaKnown RBP12.15□□□□□ -0.47
CPNE4-201ENST00000429747 KLKB1P03952 638 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 IL3P08700 152 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 ACVR1Q04771 509 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM115Q12893 351 aaPredicted RBP12.15□□□□□ -0.47
CPNE4-201ENST00000429747 PLPP4Q5VZY2 271 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF783Q6ZMS7 281 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 BHLHA9Q7RTU4 235 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.47
CPNE4-201ENST00000429747 MARCH9Q86YJ5 346 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 TRPV1Q8NER1 839 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 CNDP2Q96KP4 475 aaKnown RBP12.15□□□□□ -0.47
CPNE4-201ENST00000429747 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 TMED9Q9BVK6 235 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.47
CPNE4-201ENST00000429747 SEC14L4Q9UDX3 406 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.47
CPNE4-201ENST00000429747 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 RTCAO00442 366 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 YES1P07947 543 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 ALPPL2P10696 532 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 WASP42768 502 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 EMP3P54852 163 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 IDNKQ5T6J7 187 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SERPINA11Q86U17 422 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PDLIM5Q96HC4 596 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM246Q9BRR3 403 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CPNE6O95741 557 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CA5AP35218 305 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MLLT10P55197 1068 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CSTF1Q05048 431 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SMU1Q2TAY7 513 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 GHDCQ8N2G8 530 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PIGXQ8TBF5 258 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SLC5A11Q8WWX8 675 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 IL37Q9NZH6 218 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MAT2BQ9NZL9 334 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MYO9BQ13459 2157 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MCM3APO60318 1980 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 ORC5O43913 435 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 JRKO75564 520 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 GABARAPO95166 117 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SAGP10523 405 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CRISP3P54108 245 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CXCR4P61073 352 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 GINS1Q14691 196 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 AFMIDQ63HM1 303 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 C22orf42Q6IC83 251 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 CXXC5Q7LFL8 322 aaKnown RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 IZUMO1Q8IYV9 350 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SCRN2Q96FV2 425 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 FRMD6Q96NE9 622 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 IL17FQ96PD4 163 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MROQ9BYG7 248 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 MED28Q9H204 178 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 OR51V1Q9H2C8 321 aa12.14□□□□□ -0.47
CPNE4-201ENST00000429747 PAQR5Q9NXK6 330 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-201ENST00000429747 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 GLOD5A6NK44 160 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 TAPBPO15533 448 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PCCBP05166 539 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 SPINT3P49223 89 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 GP2P55259 537 aaKnown RBP12.13□□□□□ -0.47
CPNE4-201ENST00000429747 E2F2Q14209 437 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PNCKQ6P2M8 343 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 OR7G3Q8NG95 312 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 OVCA2Q8WZ82 227 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 RETREG1Q9H6L5 497 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms