RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TNNI3P19429 210 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 HOXA1P49639 335 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 AGTR2P50052 363 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CRISP3P54108 245 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 IL2P60568 153 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SHC2P98077 582 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 FGFBP1Q14512 234 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 STK11Q15831 433 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 KLHL12Q53G59 568 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 GPR153Q6NV75 609 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 GALNT5Q7Z7M9 940 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PIANPQ8IYJ0 282 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TAGAPQ8N103 731 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OR4C15Q8NGM1 316 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TMEM163Q8TC26 289 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SPATA17Q96L03 361 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 DPYSL5Q9BPU6 564 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TKTL2Q9H0I9 626 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TXNL4BQ9NX01 149 aaKnown RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 DHRS7Q9Y394 339 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 COMMD10Q9Y6G5 202 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 AGAP14A8MT82 685 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 KPNA5O15131 536 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ARIH2O95376 493 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TGM6O95932 706 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 LALBAP00709 142 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CSF2P04141 144 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SDC2P34741 201 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 C3orf38Q5JPI3 329 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 EFCAB12Q6NXP0 572 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 FAM92BQ6ZTR7 304 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OAFQ86UD1 273 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 GPSM1Q86YR5 675 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 VANGL1Q8TAA9 524 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 ZIC5Q96T25 663 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MFRPQ9BY79 579 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ABCG4Q9H172 646 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ABCB8Q9NUT2 735 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 EPHA6Q9UF33 1036 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 KCND3Q9UK17 655 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 C19orf81C9J6K1 198 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 E5RI56 91 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 GLP2RO95838 553 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 RECKO95980 971 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 NMBP08949 121 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SULT1A3P0DMM9 295 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SULT1A4P0DMN0 295 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MAPK1P28482 360 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MVDP53602 400 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 LAPTM5Q13571 262 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 BTBD16Q32M84 506 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TYW3Q6IPR3 259 aaKnown RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 MACC1Q6ZN28 852 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CAMKMTQ7Z624 323 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 AGBL3Q8NEM8 1001 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CD200R1Q8TD46 325 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 AP3S1Q92572 193 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 HBEGFQ99075 208 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TRIM45Q9H8W5 580 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 FTSJ1Q9UET6 329 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 RWDD3Q9Y3V2 267 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ALG5Q9Y673 324 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CFAP20Q9Y6A4 193 aaKnown RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 A0A0U1RQF3 1178 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 A0A1B0GTQ1 180 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FZD9O00144 591 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SULT1B1O43704 296 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 RECQL4O94761 1208 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 IFNA7P01567 189 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ESR1P03372 595 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ITGB1P05556 798 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PCGF2P35227 344 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 STK19P49842 368 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 HTR6P50406 440 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 WNT3P56703 355 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PURAQ00577 322 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 DHODHQ02127 395 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MRPL10Q7Z7H8 261 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 LDB1Q86U70 411 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 Q8N402 240 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 LRRC71Q8N4P6 559 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PNPLA1Q8N8W4 532 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TTLQ8NG68 377 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OMA1Q96E52 524 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC29A3Q9BZD2 475 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 MMP28Q9H239 520 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 GPATCH2Q9NW75 528 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ATP6V1HQ9UI12 483 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 KIF25Q9UIL4 384 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 C1orf226A1L170 272 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 WASHC1A8K0Z3 465 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FFAR2O15552 330 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ALDH1A1P00352 501 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ANXA3P12429 323 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZNF91Q05481 1191 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 COX10Q12887 443 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC39A12Q504Y0 691 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 USP39Q53GS9 565 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 SDE2Q6IQ49 451 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms