RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DRGXA6NNA5 263 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 NOBOXO60393 691 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF37AP17032 561 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 RPS14P62263 151 aaKnown RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF267Q14586 743 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TCTN1Q2MV58 587 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF549Q6P9A3 640 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 CDH24Q86UP0 819 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 PPP1R3BQ86XI6 285 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TADA1Q96BN2 335 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC39A13Q96H72 371 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 C17orf62Q9BQA9 187 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 CRB3Q9BUF7 120 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 NLE1Q9NVX2 485 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 USE1Q9NZ43 259 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 MARCH4Q9P2E8 410 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 EFCAB7A8K855 629 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 E7EQ34 232 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 DFNA5O60443 496 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 C8orf89P0DMQ9 161 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 UROSP10746 265 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 RPL4P36578 427 aaKnown RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 DGKQP52824 942 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 UFM1P61960 85 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 GRB7Q14451 532 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SEMA3AQ14563 771 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ABHD17BQ5VST6 288 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SH2D5Q6ZV89 423 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 THAP5Q7Z6K1 395 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 NUDT13Q86X67 352 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SETD9Q8NE22 299 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC47A1Q96FL8 570 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 NUAK2Q9H093 628 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 CPNE7Q9UBL6 633 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 CEPT1Q9Y6K0 416 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 MCIDASD6RGH6 385 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TCN2P20062 427 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 PGFP49763 221 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 IST1P53990 364 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 PSMD4P55036 377 aaKnown RBP10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TUBA4AP68366 448 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 PHC1P78364 1004 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 RAPSNQ13702 412 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 RAB39AQ14964 217 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF678Q5SXM1 525 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 FIGLAQ6QHK4 219 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC22A16Q86VW1 577 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 COX18Q8N8Q8 333 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 TEX19Q8NA77 164 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 OR4K17Q8NGC6 315 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 OR4A15Q8NGL6 344 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 FAR1Q8WVX9 515 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 RGMAQ96B86 450 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 DTD2Q96FN9 168 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC29A1Q99808 456 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 REEP1Q9H902 201 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 CLPXO76031 633 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 KIR3DL1P43629 444 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 OR4D2P58180 307 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 EPS8Q12929 822 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC15A4Q8N697 577 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 METTL25Q8N6Q8 603 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF540Q8NDQ6 660 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 GPR26Q8NDV2 337 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 MDGA1Q8NFP4 955 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 OR6C4Q8NGE1 309 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 DOK4Q8TEW6 326 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 SLC5A11Q8WWX8 675 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 APOL4Q9BPW4 351 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 BOCQ9BWV1 1114 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 METTL7AQ9H8H3 244 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 IL26Q9NPH9 171 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ADPRHL2Q9NX46 363 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF221Q9UK13 617 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 HS3ST2Q9Y278 367 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 NUP205Q92621 2012 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 ZFHX2Q9C0A1 2572 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SLC9B1P1A6NJY1 282 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 AP3D1O14617 1153 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CAPN5O15484 640 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 GFRA3O60609 400 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PTPN5P54829 565 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CASP9P55211 416 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 YPEL5P62699 121 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 NEK5Q6P3R8 708 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SLC2A7Q6PXP3 512 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 OR2I1PQ8NGU4 316 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 KLHL6Q8WZ60 621 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 LPAR4Q99677 370 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 MAP3K3Q99759 626 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CTRCQ99895 268 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 ULBP3Q9BZM4 244 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 TTYH1Q9H313 450 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 TOR3AQ9H497 397 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 STMN3Q9NZ72 180 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SPO11Q9Y5K1 396 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms