RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 DOC2AQ14183 400 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 NSDHLQ15738 373 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 BTBD16Q32M84 506 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PLEKHN1Q494U1 663 aaPredicted RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SFT2D3Q587I9 215 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CRB2Q5IJ48 1285 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PAGE2BQ5JRK9 111 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PRAMEF9Q5VWM5 478 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 B3GNTL1Q67FW5 361 aaPredicted RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 KLC3Q6P597 504 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PAPD4Q6PIY7 484 aaKnown RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 Q6ZS92 163 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CPEB2Q7Z5Q1 589 aaKnown RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CCDC91Q7Z6B0 441 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ANKRD37Q7Z713 158 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MYLK4Q86YV6 388 aaPredicted RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 GSPT2Q8IYD1 628 aaKnown RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PPP4R1Q8TF05 950 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 UBTD2Q8WUN7 234 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SLC44A1Q8WWI5 657 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 GAL3ST3Q96A11 431 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 FAR2Q96K12 515 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 RHOXF2Q9BQY4 288 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TUBB6Q9BUF5 446 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 EFCAB11Q9BUY7 163 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 FUT8Q9BYC5 575 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CD244Q9BZW8 370 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 AICDAQ9GZX7 198 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 EHD1Q9H4M9 534 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CPSF2Q9P2I0 782 aaKnown RBP8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 OPTCQ9UBM4 332 aa8.68□□□□□ -1.02
RFX3-AS1-202ENST00000427722 A0A087WUV0 522 aaPredicted RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 EXOC1LA0A1B0GW35 172 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 LRIT2A6NDA9 550 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ANKDD1BA6NHY2 528 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MAGEB17A8MXT2 336 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 K7EPI3 171 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 VPS4BO75351 444 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CLEC3AO75596 197 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 KLHL2O95198 593 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 F10P00742 488 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PCNAP12004 261 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 RNH1P13489 461 aaKnown RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MTHFD2P13995 350 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 IL10P22301 178 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 GNLYP22749 145 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CERS1P27544 350 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SOX11P35716 441 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MSH2P43246 934 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SERPINB9P50453 376 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 AP2B1P63010 937 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ACTN3Q08043 901 aaPredicted RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ZNF169Q14929 603 aaPredicted RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TLR1Q15399 786 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PFKFB4Q16877 469 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PLAG1Q6DJT9 500 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TRIM40Q6P9F5 258 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 IGFL2Q6UWQ7 119 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 IFT20Q8IY31 132 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PLD6Q8N2A8 252 aaKnown RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 CISD2Q8N5K1 135 aaKnown RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TEX9Q8N6V9 391 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 DNAJB14Q8TBM8 379 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PSMF1Q92530 271 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SNRNP40Q96DI7 357 aaKnown RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 MS4A6EQ96DS6 147 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 C19orf60Q96EN9 201 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 WDR34Q96EX3 536 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 IMMP1LQ96LU5 166 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 LPAR4Q99677 370 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SLC29A3Q9BZD2 475 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PITHD1Q9GZP4 211 aaPredicted RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 REXO4Q9GZR2 422 aaKnown RBP8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ASF1BQ9NVP2 202 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PLA2G3Q9NZ20 509 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 COPG2Q9UBF2 871 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 XPR1Q9UBH6 696 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 VPS4AQ9UN37 437 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ANGPTL3Q9Y5C1 460 aa8.67□□□□□ -1.02
RFX3-AS1-202ENST00000427722 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 A0A088AWK7 358 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 LRRC14BA6NHZ5 514 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 A8MUI8 341 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 B3GALT2O43825 422 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 PRMT3O60678 531 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SH3BGRLO75368 114 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 KRT38O76015 456 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 TBX6O95947 436 aaPredicted RBP8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ABHD2P08910 425 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 SMIM10L1P0DMW3 83 aa8.66□□□□□ -1.02
RFX3-AS1-202ENST00000427722 ICAM2P13598 275 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms