RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PID1Q7Z2X4 250 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM122BQ7Z309 247 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRICKLE2Q7Z3G6 844 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 LAX1Q8IWV1 398 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC22A15Q8IZD6 547 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARMC10Q8N2F6 343 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM151AQ8N4L1 468 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARFGAP1Q8N6T3 406 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 C2CD4AQ8NCU7 369 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CCNYQ8ND76 341 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF548Q8NEK5 533 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR56A4Q8NGH8 313 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR9I1Q8NGQ6 314 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 JOSD2Q8TAC2 188 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CREB3L4Q8TEY5 395 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 C15orf40Q8WUR7 153 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RXFP2Q8WXD0 754 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PMM1Q92871 262 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RFT1Q96AA3 541 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 P2RY11Q96G91 374 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TOX2Q96NM4 488 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC4A9Q96Q91 983 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RBP7Q96R05 134 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACOX2Q99424 681 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC38A3Q99624 504 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TINF2Q9BSI4 451 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CNPPD1Q9BV87 410 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SNRNP25Q9BV90 132 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TAPBPLQ9BX59 468 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 NLNQ9BYT8 704 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRRG3Q9BZD7 231 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CD244Q9BZW8 370 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPRTNQ9H040 489 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 BTBD1Q9H0C5 482 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HDHD2Q9H0R4 259 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR51E2Q9H255 320 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 NCOR1P1Q9H4R4 102 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ANKRD19PQ9H560 264 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TDRD3Q9H7E2 651 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CARS2Q9HA77 564 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MID1IP1Q9NPA3 183 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACSS2Q9NR19 701 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 C1orf109Q9NX04 203 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF70Q9UC06 446 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HCN2Q9UL51 889 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 DUSP12Q9UNI6 340 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CRYL1Q9Y2S2 319 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPL36Q9Y3U8 105 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 DNAJC15Q9Y5T4 150 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNMB2Q9Y691 235 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDH10Q9Y6N8 788 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 V9GYQ6 96 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABCA3Q99758 1704 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SYNJ2BP-COX16A0A087WUM0 186 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CIB4A0PJX0 185 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDC14CA4D256 554 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 HMSDA8MTL9 139 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 C1orf196B1AJZ1 125 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPEF2O14830 753 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PCDH17O14917 1159 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CASKO14936 926 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SYN3O14994 580 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 RGS14O43566 566 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SSX4O60224 188 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLOD3O60568 738 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CREG1O75629 220 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 IFNA2P01563 188 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CSF2P04141 144 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 HEXAP06865 529 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 NFICP08651 508 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 HBQ1P09105 142 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SBK3P0C264 359 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLURP2P0DP57 97 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 NR2F6P10588 404 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 FOLR2P14207 255 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF37AP17032 561 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 RHOQP17081 205 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GJA1P17302 382 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PTPRAP18433 802 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PSMB4P28070 264 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC6A1P30531 599 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 AGTR1P30556 359 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GSK3AP49840 483 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 EPHA5P54756 1037 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TGFB2P61812 414 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 EIF5AP63241 154 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 DEFA5Q01523 94 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC6A3Q01959 620 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PTPN11Q06124 597 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHAF1BQ13112 559 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CSHL1Q14406 222 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 OPCMLQ14982 345 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PAFAH1B3Q15102 231 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TAF1AQ15573 450 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SEZ6Q53EL9 994 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARHGAP15Q53QZ3 475 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms